| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2334 |
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| Symbol | |
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| ID | 6314091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2492764 |
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| End bp | 2494671 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642651060 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001925031 |
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| Protein GI | 188581586 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.149976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA CCCGGTTCCA CTCGCTCATC GATACATTCT CGGCCCGCCC GGATGGTGCA
GCCTACACGA TTGCGCGCTA CCGGGTGCTC AACCGGCAGG TGCTGGTTCT GTACACGACC
ATCGGCAGCA ACGCGCTCGG GCTCGCCCAT ACATATTACG GAGCGGCGCC GGACTGGATG
ATCGTCTGGC CGCTGGCGAT CCTGCTCGGG CTCTGCATCG TGCGAAGCAG CCTCTGGGTG
AAGTCGCTCG TCTCGCTGCC CCCCCTCGAC ACCATGGCCA AGCGGCTGAA CGCGACGACT
CACCTCGCGA TCGTCCTGTC GATCATCCTC CCGGTCTGGG CGTTCTCGTT GGTCCCTTAT
GGCGGCTTGC CGGAGAGCAT GATCGTCGTG TTCTCGCTGA CGATCATCAT GACCGTCAGC
GTCCAGTGTC TGCTTCAGCA CCCGTCCGCG GCGGTGAGCA TCTTCATCAT CACCCTCGTG
CCGGCCGTCT ACCTGATCAT TCGCGGCGAC ACGCTCCTGC ATGTCATGGC GGTCAACTAC
GTCCTTCTCG TCGGCGGAAT GGTGGTCGTC CAGTACTTCT CCTACTGCGA TTTCCGCCGG
TTCGTCGGCC TCAGCGAGGA GAACCGGCGC CTCGCCTTCA CCGATTACCT GACCGACCTG
CCCAACCGCC GCGCTTTCTT CGCCGAGATC GAGCGGAGGG CCCGGCGCCG CAGCGGCGAG
CCGTTCCACG TCGGACTGAT CGATCTCGAC GGCTTCAAGC CGGTCAACGA CAGTTTCGGT
CACCGGGCCG GCGATGCCGT GCTGCGCGAG GTCGCGCATC GCCTGAAGGC CAAGGAGATC
GGCTGGATCG GCCGGCTCGG CGGCGACGAG TTCGGCCTCA TCGTCGAGGG CGGGGCCGAC
CTCGCCCAGA TCGGGCGACG CATCTGCGGC GGTTTGGCGA GACCCTTTCC CCTGCGCGAG
GGGACGGCCC AGATCGGCGC TTCGATCGGC TTCGCGCGCT ATCCGGATGC CGCCACGTCA
CCGGAGATGC TCCTGGAGCG AGCGGATTTC GCGCTCTACC ACGCCAAGAT CCATCAACGC
GGCACCGCCG TCTCGTTCGC GCCGGAACAC GAGGAGCGGC TGCGCGACAT CGCGATGATC
GAGCAGGCCC TGCGCCGGGC CGACCTCGCG GCGGAGTTCG ACCTGCACTA TCAGCCGATC
ATTGATACCG TCGACCACCG GATCGAGGCC TACGAGGCGC TGGCACGCTG GAACAGCCCG
GTCATCGGCC GCGTCTCGCC GGCCGAATTC ATCCTCGTGG CCGAGCAGAC CGGTCTGATC
CGTGACCTGA CCCCGATCTT GTTCGGCAAG GCGCTGGCGG CGCTGCGGAC CTGGCCGGAG
GATGTCCGGC TCTCCTTCAA CCTGTCGGCG CAGGACATCG CCTCGCCCGC GAGCGTCGCC
CGGCTCGCCG AACTCGTCGT TGCGAGCGGC CTCGACCCGG GCCGCATCGT CTTCGAGGTG
ACCGAGACCG GATTGATGCG CGATCTCGTC GAGGCCCATT GCTCGCTCGC CACGCTGAAG
GAGTTGGGCA TCGGCATCGC GCTGGACGAT TTCGGCACCG GCTATTCGAG CTTCAGCTAC
GTCCACCGGC TGCCGCTCGA TCGGCTGAAG ATCGACCGCA GCTTCGTCAT CTCGCTCGGC
GACGACGCGA CCTCGCTCAG CATCATCCGC TCGATCGTCG ATATGAGCCG CAATCTCGGG
CTCCACTGCG TCGTCGAGGG GGTCGAGACC TTCGACCAGA TGCTGCTGCT GCGCTCGGCC
GGCTGCCGCT CGATGCAGGG TTACCTGTTC AGCAAGCCGA TGCCGGAGGA GGCCGTCTCC
GGCTTCGGCC TCGTCGTGCC CGAACACGCC GAGGTTCTGG CCTCCTGA
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| Protein sequence | MALTRFHSLI DTFSARPDGA AYTIARYRVL NRQVLVLYTT IGSNALGLAH TYYGAAPDWM
IVWPLAILLG LCIVRSSLWV KSLVSLPPLD TMAKRLNATT HLAIVLSIIL PVWAFSLVPY
GGLPESMIVV FSLTIIMTVS VQCLLQHPSA AVSIFIITLV PAVYLIIRGD TLLHVMAVNY
VLLVGGMVVV QYFSYCDFRR FVGLSEENRR LAFTDYLTDL PNRRAFFAEI ERRARRRSGE
PFHVGLIDLD GFKPVNDSFG HRAGDAVLRE VAHRLKAKEI GWIGRLGGDE FGLIVEGGAD
LAQIGRRICG GLARPFPLRE GTAQIGASIG FARYPDAATS PEMLLERADF ALYHAKIHQR
GTAVSFAPEH EERLRDIAMI EQALRRADLA AEFDLHYQPI IDTVDHRIEA YEALARWNSP
VIGRVSPAEF ILVAEQTGLI RDLTPILFGK ALAALRTWPE DVRLSFNLSA QDIASPASVA
RLAELVVASG LDPGRIVFEV TETGLMRDLV EAHCSLATLK ELGIGIALDD FGTGYSSFSY
VHRLPLDRLK IDRSFVISLG DDATSLSIIR SIVDMSRNLG LHCVVEGVET FDQMLLLRSA
GCRSMQGYLF SKPMPEEAVS GFGLVVPEHA EVLAS
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