| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2327 |
|---|
| Symbol | |
|---|
| ID | 6313772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2483477 |
|---|
| End bp | 2484625 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642651053 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_001925024 |
|---|
| Protein GI | 188581579 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.239652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.179053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTTC TCGTTCATCG GCACGTCACG GCGATCCTCG AAACCCTCTC CCCGCAAAGG
GGGGAGGGGA AGGCGTGCGC CTTTGAAGGG AGAGCCGTCG GTCGGGCCCG TGCTGTCTCC
CTTGCCGCGC TGAGCGCCTG CGCCATCCTC GCGCTTGATG TCGGGGGGCT GCGCGCCGCG
CCGAAACAGC CGACGGCGAA GGAGCCCCCT GCGCCGGCGA CGGCGAAACC GAACCAACTC
GACCTCAAGC GCGAGCTGCC CTCGCCCTAC TCGGCGAACG CCGAGGGGGC GAGACCGGCG
ACCGCCAACC CGAACGCGGA TGCCGCCTAC GGCGCCTATC AGCGCGGCCG CTACGTCACC
GCCTTCCGCG AGGCGACCAA GCGCATCGAG GCGAACCCGA AGGACGCCGC GGCGATGACG
CTGCTCGGCG AACTCTACAA CCAGGGCCTC GGGGTCAAGC AGGATCCCAA GCGCGCCCAC
GAGTGGTACC GGCTCGCCGC CGCGCAGAAC GACGCCAACG CCATGGCCTC CCTCGGCCTG
ATGGCGATGG ACGGGCGCGG GCAGCCCAAG GACGAGAAGG CGGGCCGCGC CTGGCTCGAA
CAAGCGGCGC GCAAGGGGCA GCCCAGTGCG AGCTACAATC TCGCGCTGAT CCAGCTCGCC
GGCAGCAAGC CGGAGGATCT CGCCGCCGCC GTCGCCAATT TCCGGACGGC GGCCGAGGCC
GAGGTTCCGG CCGCGCAATA CGCCCTCGGC GTGCTCTACC TCCAGGGCAA GGGGGTTCCC
AGGGACACGA CCCAGGCGGC GCAATGGTTC CGCCGCGCCG CCGACAACGG CGATCTCGGG
GCCGAGGTCG AGTTCGCGAT CCGGCTGTTC AACGGCGACG GCGTGCCCAA GGACGAGGCC
CGCGCCGCCC GCTACTTCCT GCACGCGGCC CAGCGCGGCA ACGCCATCGC CCAGAACCGG
ATCGCCAAGC TCTACGTCGC CGGCCGTGGT GTGTCGAAGA ACCTCGTCGA GGCGGCGGCC
TGGAACCTCG CCGCGGCCTC GCAGGGCCGG GCCGATGCCG GGCTCGATCA GGCGACCGCC
GGACTCAACC CTGACGAGCG CCGGCGCGCG GAGGCGCTGG CGGCGGATCG GGCGAACCTG
TCGCAATAG
|
|---|
| Protein sequence | MTFLVHRHVT AILETLSPQR GEGKACAFEG RAVGRARAVS LAALSACAIL ALDVGGLRAA
PKQPTAKEPP APATAKPNQL DLKRELPSPY SANAEGARPA TANPNADAAY GAYQRGRYVT
AFREATKRIE ANPKDAAAMT LLGELYNQGL GVKQDPKRAH EWYRLAAAQN DANAMASLGL
MAMDGRGQPK DEKAGRAWLE QAARKGQPSA SYNLALIQLA GSKPEDLAAA VANFRTAAEA
EVPAAQYALG VLYLQGKGVP RDTTQAAQWF RRAADNGDLG AEVEFAIRLF NGDGVPKDEA
RAARYFLHAA QRGNAIAQNR IAKLYVAGRG VSKNLVEAAA WNLAAASQGR ADAGLDQATA
GLNPDERRRA EALAADRANL SQ
|
|---|
| |