| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2278 |
|---|
| Symbol | |
|---|
| ID | 6312934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2433830 |
|---|
| End bp | 2434747 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642651003 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001924975 |
|---|
| Protein GI | 188581530 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.232258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.674671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTCCG ACCGGTTGCG GATCGGGATC GATCTCGGCG GCACCAAGAT CGCCGGGATC
GCCCTCGATG CCGAAGGGAC CACGCGGGCG GAGATCCGCG TCCCGACCCC GCGGGGCGAC
TATGCCGGAA CCCTCGACGC CATCGCCGGC CTCGTCGCCA CACTGGAGCG GCAGGCCGGC
ACGACGGGGG CGAGCGTCGG CGTCGGCATG CCCGGCGCGG TCTCCCGCGC CACCGGTCTC
ATCAAGAACG CCAACTCCGT CTGGCTGAAC GGCCGCCCGT TCCCGCAGGA TCTCGCCGCC
CGTCTCGGCC GCCCGGTGCG GGTCGAGAAC GACGCCAACT GCCTCGCCGT GTCGGAGGCG
GTGGACGGGG CCGGCGCGGG TGCGGACCTC GTCTGGGCGA TCATCCTCGG CACCGGCGTC
GGCTCCGGGA TCGCCGTGCG GGGGCAGGCG CTGACAGGCC GCAACGCCAT CGCCGGGGAA
TGGGGGCACA ACCCGCTGCC CCGGCCCGGC GACGACGAGC GCCCCGGCCC CGCCTGCTAT
TGCGGCCGCC ACGGCTGCAT CGAGTCCTGG CTCTCCGGTC CCGGCCTCGC CGCGGATTTC
CTTCGGCAGA CGGGTGAGGC GCGATCCGGC GAAGACATCG TCGCCCTGGC GCGGGCCGGG
CACGCGGGCG CCGCGGCGGC GATGGCGCGC TATCGCGACC GGCTCGGGCG CAGCATCGCC
CACGTCGTCA ATCTCCTCGA TCCCGACGTG ATCGTGCTCG GCGGCGGTCT CTCGCGGGTC
GAGGGGCTGG CCGCGGCGTT GCCGGGGGCG ATTGCACCGC ACGTCTTCTC CGATGCCTTC
GACACGCCGG TGCGGGCGAG CCGGCACGGC GACGCGTCGG GCGTGCGCGG CGCGGCATGG
CTTTGGGGGA CGGCATGA
|
|---|
| Protein sequence | MASDRLRIGI DLGGTKIAGI ALDAEGTTRA EIRVPTPRGD YAGTLDAIAG LVATLERQAG
TTGASVGVGM PGAVSRATGL IKNANSVWLN GRPFPQDLAA RLGRPVRVEN DANCLAVSEA
VDGAGAGADL VWAIILGTGV GSGIAVRGQA LTGRNAIAGE WGHNPLPRPG DDERPGPACY
CGRHGCIESW LSGPGLAADF LRQTGEARSG EDIVALARAG HAGAAAAMAR YRDRLGRSIA
HVVNLLDPDV IVLGGGLSRV EGLAAALPGA IAPHVFSDAF DTPVRASRHG DASGVRGAAW
LWGTA
|
|---|
| |