| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2248 |
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| Symbol | |
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| ID | 6309858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2402589 |
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| End bp | 2404583 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642650973 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001924945 |
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| Protein GI | 188581500 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.626967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGA TCCGAGGCCG CCGGGAGCTG TTGAGTGGGA TTCTATCGAA ATATACCGAT
CGCGACGCTT GTACCTGCCA GCTTGTCGAG TTGCAGAAGC AAGTCCCGTC GCTGTACGCC
CTGCTCTCCG TCAACGCCTG CGCGCTCGCC CTCACCCATT ACGCGCTCGC TCCGGCCTGG
CTGACGGTTG CTTTGCCGGG CGGGATGATC GGTCTCTGCG CGTTGCGCGC GGTGCACTGG
TGGCGCCTGC GTCCGCAGGA CATCTCCGGA CCCGAGGCCC TGAAGCGGCT GCGCGGCACG
ACCATCCTCA CCGTTCTGTT CTCGGCCTTC TTCGTTGTTT GGGCGATGAT GCTGAACGGA
TATGGCGGCC CGTTCGAGCA GGGGCACGTC GCGATCTTCG TCGCGATCAC CGTCATCGCC
TGCATCTTCT GCCTGACGCA CCTGCCGGCG GCGGCCCTTC TGGTGACCGT CATCGTCATC
GGCGGCTTCT CGATCCACTG CTTCGCCACC GGAAACGACG TCTTCATCGC GATCGCGCTC
AATACGGCCT TCGTCGCCGT GGTGATGGTG CGCATCCTCG TCAACAACTT CCTGGCCTTC
CTCCAACTGA TCGCCTCGAA GGCCGAGGCG CAGCGGCTCA GCGCGGAGAA CGAGCGTCTG
GCGCATACCG ACAGCCTCAC TGGGCTGCCC AACCGGCGCT ATTTCTTCCA GCGGCTCGAT
GCGCTGATCG CCGCCGCGTC CGGCCGGCCC GCCGCCTTCG CACTGGCGAT CTTCGACCTC
GACCGTTTCA AGCCGATCAA CGACACCTTC GGCCACACCG CGGGGGACCG GGTGCTGGAG
GAGACGGGGC GCCGGCTCGA AGCCTTTGCC GGCGGCGGCG TGACGATCGC CCGCCTGGGC
GGTGACGAGT TCGGCGTGCT GATTCCCGCA ATCGCCGGTC CGGACGCGGC GGTGGAGCTG
TGCAACCGCA TCTGCGCGGC GCTGCACGCG CCGATCGCGC TGGGCGAGAC GCAGGTCGTG
CCGGGCTGCT CCGGCGGTCT GGCGCTGTAT CCCTGCGCCG GACGCGCCGC GGACGCGCTG
TTCGACCGGG CCGACTACGC GCTCTACCAT TCCAAGGAGC GCAAGCGCGG GATGACGACG
CTGTTCTCGC AGGAACACGA GGACGCGATC CGGGCCGAGC GCGCGGTGGA GACGGCGCTG
CAGAGCGCGG ATCTCGCCGC CGAGATGGAG ATGCACTACC AGCCGATCCT CGATACGGCG
ACGGACCGGA TCACGACGGT CGAGGCGCTG GCGCGCTGGA CCAGCCCGAA GCTCGGGCGC
GTGCCGCCCG ACCGCTTCAT CGCCGTGGCG GAGCGCTGCG GCATGATCCA CTCGTTGACG
CTCCTCCTCC TGCGCAAGGC GCTCGCCGAC GCCGTCCGGC TCCCGGCCGG AGTCGGATTG
TCGTTCAACC TCTCCTCGCA CGACCTCGCC TCGCCGGAGA CCGTCCTGGC GATCCTCGCC
GCCGTGCGGC AGAGCGGGCT CGATCCCCGG CGGATCACCC TCGAACTGAC GGAGACGGCC
TTGATGCGCG ACTTCGAGGG GGCGCAGCAG GCGATCACGC TCCTGCGCGC GCTCGGCATC
AAGATCGCGC TCGACGATTT CGGAACCGGC TATTCGAGCC TCAGCTATGT CCACCGCCTG
CCGCTGGACC GGATCAAGAT CGACCGCGGC TTCATGGCCG ACGTCGAATC GGATCTCGGC
CGCAGCGTCG TCATCACCAT CCTCGGCCTG TGCGGGAATC TCGGGGTGGA CGGCATCGCC
GAGGGCATCG AGACGGCGGA GCAGTTGAGC GCCGTGCGCC GCCACGGCTG CCGCTACGTG
CAGGGCTACC TGATCGGCAT GCCGCGGCCG ATGACGGAGC TGCTGGACGA CCTTAGGATG
ACGGCCCCGG CCGAGCGCGT GTCCGCGCTG TCGGGGGAAG CGATCGCAGC CGTTTTGCGC
CCGGCGGCAT CCTAA
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| Protein sequence | MRLIRGRREL LSGILSKYTD RDACTCQLVE LQKQVPSLYA LLSVNACALA LTHYALAPAW
LTVALPGGMI GLCALRAVHW WRLRPQDISG PEALKRLRGT TILTVLFSAF FVVWAMMLNG
YGGPFEQGHV AIFVAITVIA CIFCLTHLPA AALLVTVIVI GGFSIHCFAT GNDVFIAIAL
NTAFVAVVMV RILVNNFLAF LQLIASKAEA QRLSAENERL AHTDSLTGLP NRRYFFQRLD
ALIAAASGRP AAFALAIFDL DRFKPINDTF GHTAGDRVLE ETGRRLEAFA GGGVTIARLG
GDEFGVLIPA IAGPDAAVEL CNRICAALHA PIALGETQVV PGCSGGLALY PCAGRAADAL
FDRADYALYH SKERKRGMTT LFSQEHEDAI RAERAVETAL QSADLAAEME MHYQPILDTA
TDRITTVEAL ARWTSPKLGR VPPDRFIAVA ERCGMIHSLT LLLLRKALAD AVRLPAGVGL
SFNLSSHDLA SPETVLAILA AVRQSGLDPR RITLELTETA LMRDFEGAQQ AITLLRALGI
KIALDDFGTG YSSLSYVHRL PLDRIKIDRG FMADVESDLG RSVVITILGL CGNLGVDGIA
EGIETAEQLS AVRRHGCRYV QGYLIGMPRP MTELLDDLRM TAPAERVSAL SGEAIAAVLR
PAAS
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