Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2235 |
Symbol | |
ID | 6313370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2387818 |
End bp | 2388546 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642650960 |
Product | pseudouridine synthase |
Protein accession | YP_001924932 |
Protein GI | 188581487 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.7178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.112154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCGG TGCGCCTTGA CCGGCTGCTG GCCAATCTCG GCTACGGCTC GCGCCGGGAG GTCGAGGGGC TGGCCCGTGC CGGCCTCGTC CGCCGCGACG GGGAGGCGCT GAGGGATGCC TCGCAGCGCA TTGCCCTCGA ACCCGACCTT TCCGCCCGGA TGACGGTGCA GGGTGCGCCT CTCGATCCGC TGCCCGGCGT CTGCCTGATG CTGCACAAGC CCCTCGGCGT CACCTGCTCG CACAAGGAGG CGGGGCCGCT GATCTACAGC CTGCTGCCGG AGCGCTGGCG GCGGCGCGAT CCGGCGCTCT CCACGGTCGG GCGTCTCGAC AAGGAGACCT CGGGCCTGCT GCTCATGACC GATGACGGCG CGCTGCTGCA CCGGATCATC GCGCCGAAGG CCAAGGTGGC CAAGCGCTAC CGGGTGACGC TGGCCCGTCC GCTCCAGGGC GACGAGGCCG CGATCCTCGC CTCGGGCGAA CTGATGCTGG AGGGCGAGGA CAAGCCGCTC CTGCCCGTCG AGATGGAGGG TGAGGACGCG ACCCACTGCA CCGTGACCCT GCACGAGGGC CGCTACCATC AGGTCCGGCG CATGTTCGCC GCTTTGGGCA ACCACGTCGA TGCGCTCCAC CGCGACCGCG TCGGCGGTCT GGCGCTCCCC GCCGACCTGC CGGCGGGGGA GTTCCGGATT CTGGGGCCGG GCGAGATTGC CGCGGTGTTC GGGGGATAG
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Protein sequence | MKAVRLDRLL ANLGYGSRRE VEGLARAGLV RRDGEALRDA SQRIALEPDL SARMTVQGAP LDPLPGVCLM LHKPLGVTCS HKEAGPLIYS LLPERWRRRD PALSTVGRLD KETSGLLLMT DDGALLHRII APKAKVAKRY RVTLARPLQG DEAAILASGE LMLEGEDKPL LPVEMEGEDA THCTVTLHEG RYHQVRRMFA ALGNHVDALH RDRVGGLALP ADLPAGEFRI LGPGEIAAVF GG
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