| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2234 |
|---|
| Symbol | |
|---|
| ID | 6313369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2386861 |
|---|
| End bp | 2387787 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642650959 |
|---|
| Product | methyltransferase small |
|---|
| Protein accession | YP_001924931 |
|---|
| Protein GI | 188581486 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.183279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGA CCGATCCTGA CCTCCGCGCC GTCCTCTACG GCCTCCCGCC CGCCGAACTC
GCGGCTCTGC CGGAGGGGGC CGCGCAGGTC TCGCCGCTGA TCCCCGGCTC GGCGCGGTTG
GAGGACGTGG CCGAGGCGAG TCTCGAAACC GCCGTGCTGC TGGCGCCGCC GGGCACGGTC
GAGCGGCGCT ACGCTCTGGC GCTGGCGCTC CGGGCGCTGC GGCCCGGTGG CCGGCTGGTG
GCGCTGGCGC CCAAGGACAA GGGCGGCACG CGGCTCGCCA AGGAGCTGCG CGGCTTCGGC
TGCGCGGTAA CGGACGAGCC GCGGCGCCAC CACCGCATCT GCACCGCGGC GCGGCCCGAG
GCGCCCTCGG GCATCGAGGC CGCGATCGCG GGCGGCGCCC CGCGCCACAT CGACAACCTC
GCGCTCTGCA CCCAGCCGGG CATCTTCTCC TGGGACCGGC TCGATCCCGG AAGCGCCCTG
CTGCTGCGCC ACCTGCCGCC GCTCGCGGGA CGCGGCGCCG ATTTCGGCTG CGGCCTCGGC
ATCCTGGCGC GGGCAGCACT GAAATCGGAA AAGGTCGCCG CGTTGGCGCT GATCGACCTC
GACCGCCGCG CGATCGAGAT GGCCCGGCGC AATGTCGCCG ACGCGCGCGC CAGCCTGCAC
TGGGCCGACC TGCGCGGATC GGAACCGGCC CTGACGGGCC TCGACTTCGT CGTCACCAAT
CCCCCCTTCC ACGATGGCGG CGCCGAGGAT CAGGCGCTGG GGCAGGTCTT CATCGCCCGT
GCGGCCGCAG CCCTGCGGCC GGGCGGGACG CTCCACCTCG TCGCCAACGC CCATCTGCCC
TACGAAGCGC CCCTGCGCGC CGCCTTCCGC ACGGTCACGC CGGTGGTGAC GGAGGGCGGC
TACAAGCTGT TCGAGGCGCG CAAGTGA
|
|---|
| Protein sequence | MPQTDPDLRA VLYGLPPAEL AALPEGAAQV SPLIPGSARL EDVAEASLET AVLLAPPGTV
ERRYALALAL RALRPGGRLV ALAPKDKGGT RLAKELRGFG CAVTDEPRRH HRICTAARPE
APSGIEAAIA GGAPRHIDNL ALCTQPGIFS WDRLDPGSAL LLRHLPPLAG RGADFGCGLG
ILARAALKSE KVAALALIDL DRRAIEMARR NVADARASLH WADLRGSEPA LTGLDFVVTN
PPFHDGGAED QALGQVFIAR AAAALRPGGT LHLVANAHLP YEAPLRAAFR TVTPVVTEGG
YKLFEARK
|
|---|
| |