Gene Mpop_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2228 
Symbol 
ID6309898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2381683 
End bp2382723 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content71% 
IMG OID642650953 
Productfatty acid desaturase 
Protein accessionYP_001924925 
Protein GI188581480 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0932296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCA ACGCCAAGGA GTGCCTCTCG ACGGAGCGGG TGATCTCCGA TCCCGGCGTG 
TCGGCGACGG AGGGGCGCGT CGCCTGGGCG CCAGAGCGAT CGCTCTGGAT CGGCGGGATG
ACGCTCGCCG CCCTCACGCT CGGGCCGGTC TTCGTCACCC CAGGGGCGGT GATACTGTTC
CTCGTCACGA GCGCCGTGAC GCTCTGCCTG GGGCATTCGG TCGGGCTGCA CCGGCTCCTG
ATCCACCGCA GCTTCGAGGC GCCCTTGTGG TTGGAGCGCG TCATGGTCTG GCTCGGCACG
CTGGTGGGAA TGGCGGGGCC GCTGGGCATG GTGCGGCTGC ACGACATGCG CGACTGGGCG
CAGCGGCAGG CGGCCTGTCA CGATCTGCAC GCGCACCGCG CACGCCTGCT GAAGGATGCG
TGGTGGCAGA TGCATTGCCG GCTGGACCTA GCCCATCCGC CGCGTTTCGT GCCGGAAGCG
CGGTTGCGGG ACGATGCCTT CCTGCGCGGG CTGGAGGCGA CGTGGATGCT GCAGCAGGTG
CCGCTCGGCC TCGTCTTCTT CTCCCTGGGA GGGATGCCGT GGCTGGTCTG GGGCATCGCC
GTGCGTGTGG CGGTCTCGGT GACAGGGCAT TGGGCCGTCG GGCACGTGAC GCATCGGCGC
GGGCCGCAGG GCTGGGCGGT CGATGGTGTC GCGGTGCAGG GGTACGATCT ACCGAGAGTG
GCGCTGATTA CCTTCGGCGA GGCGTGGCAC GGCAACCACC ACGCTTGGCC GGGCTCGGCC
CGGCTGGGTA TCGAGCCGGG CCAAGCCGAT CCGGGCTGGT GGGTCCTATT GGCGCTGCGG
CGACTCGGAT TGGTTTGGGG GCTGCGCGAA CCGGCGGATC TTCTTCCACG GGCCGGACTG
CGGCGGCTGG GAGCAGTGGC AGCCGTCGGG CAGGGGGGAG ACTGTGAGGC TTCGGTCGGC
GGACCGCTCC GGCCCTCTTT CCGCTCCGGA TCGCCCTGCG CCGCGTCCGC GACGCTTCCC
ACCCCCGGCC GCGCCGGCTA A
 
Protein sequence
MQRNAKECLS TERVISDPGV SATEGRVAWA PERSLWIGGM TLAALTLGPV FVTPGAVILF 
LVTSAVTLCL GHSVGLHRLL IHRSFEAPLW LERVMVWLGT LVGMAGPLGM VRLHDMRDWA
QRQAACHDLH AHRARLLKDA WWQMHCRLDL AHPPRFVPEA RLRDDAFLRG LEATWMLQQV
PLGLVFFSLG GMPWLVWGIA VRVAVSVTGH WAVGHVTHRR GPQGWAVDGV AVQGYDLPRV
ALITFGEAWH GNHHAWPGSA RLGIEPGQAD PGWWVLLALR RLGLVWGLRE PADLLPRAGL
RRLGAVAAVG QGGDCEASVG GPLRPSFRSG SPCAASATLP TPGRAG