| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2222 |
|---|
| Symbol | |
|---|
| ID | 6308849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2375638 |
|---|
| End bp | 2376447 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642650947 |
|---|
| Product | GTP cyclohydrolase I |
|---|
| Protein accession | YP_001924919 |
|---|
| Protein GI | 188581474 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0302] GTP cyclohydrolase I |
|---|
| TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0899114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCA AGCCTGACAG CACGACCATG AAGGCGCGTG TGGCGAAGGC CGGAGATGCC
ATGGATGCCG CCCTCAAATC CCTGTCCTAC GGCATGAGCG ACGACGAACG CCGCATGAGC
GCGGTCGGCT TGCAGGGGAT GCGCGGCGCC AACGATCCCG GCCGCCCCGA GAGCGCCCCC
GACATCGCGC CTTTGCCCGA TTCGGCCCAG CGGGTGCCGA ACGAGGTCGC GCTCGGCCGT
CCGAGCCGGC AGGAGGCGGA GGCCGCCGTG CGCACGCTGC TGCGCTGGGC CGGCGACGAC
CCGACCCGCG AGGGGCTGCT CGACACGCCC GCCCGCGTGG TGAAGGCCTA CGAGCAGATC
TTCGGCGGCT ACCGCGCCGA CGCGGACGCT TTGCTGGAGC GCGTCTTCGA GGAGGTCGAG
GGCTATTCGG ACGCCGTGCT GGTGCGCGAC ATCCCATTCT ACTCGCATTG CGAGCACCAC
ATGGTGCCGT TCATGGGGCT CGCCCACATC GCCTACTACC CCACCAAGGG TGTGGTCGGC
CTCTCCAAGC TCGCCCGCGT GGTCGATGCC TTCGCCCGCC GCCTGCAGAC GCAGGAGACG
ATGACGGCGC AGATCGCCGA CACCATCGAA AGCATCCTTC AGCCCCGCGG CTGCGCCGTG
ATGGTCGAGG CGGAGCACCT CTGCATGGCG ATGCGCGGCG TGCAGAAGGC CGGTGTGTCC
ACCATCACCA CCCAGTTCCG CGGAGTCTAC AGGACCGATC CGTCCGAGCA GGTCCGCTTC
CTGACCTTCG TGCGGAACCA GAAGGGCTGA
|
|---|
| Protein sequence | MYAKPDSTTM KARVAKAGDA MDAALKSLSY GMSDDERRMS AVGLQGMRGA NDPGRPESAP
DIAPLPDSAQ RVPNEVALGR PSRQEAEAAV RTLLRWAGDD PTREGLLDTP ARVVKAYEQI
FGGYRADADA LLERVFEEVE GYSDAVLVRD IPFYSHCEHH MVPFMGLAHI AYYPTKGVVG
LSKLARVVDA FARRLQTQET MTAQIADTIE SILQPRGCAV MVEAEHLCMA MRGVQKAGVS
TITTQFRGVY RTDPSEQVRF LTFVRNQKG
|
|---|
| |