Gene Mpop_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2217 
Symbol 
ID6308844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2371376 
End bp2372200 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content71% 
IMG OID642650942 
ProductRhomboid family protein 
Protein accessionYP_001924914 
Protein GI188581469 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0928322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCT CTCCCGATCT GCCGCACCAG GGCCGCGTTC CCGTCTTCAA CCTGCCGGGG 
ATCGTCACGA TCTCGATCGC GGTCCTGGCC GCGATCCACG GTCTCCGCAG CGTCCTGCCG
GACGAGACCG ACCTGTCGGT GCTCCTGAAC CTCGCCTTCA TCCCCGCCCG CTGGACCGCC
GCGTTCGATC CCGGATCGGC GGCCGAGATC ATCCGGGCGG CGGGGGAGGG GGCGGGCGGA
GCCGAGATCG CCTCGGCGCG GCAGGACTTC GCCCGCTATC TCGTGGCCGA TCCGTCGTCG
ATGCCCTGGA CCGGCGCGAC CTATGCCCTG CTGCACGGCT CCTGGGTCCA CCTGATCTTC
AACGCGGTGT GGCTCGCCGT GTTCGGCACC CCGGTGGCGC GCCGCTACGG CGTCCTGCGC
TACGGCTTGC TGGCGCTCGC CGGCATCGTC GCGGGCGCCG TCGTCCACCT CCTCGTCGAT
CCCTACAGCC TCATGCCGCT GGTCGGCGCC TCGGCCGGCA TCTCGGCCCT GATGGCGGCG
GCGGCCCGCT TCGTGTTCCA GCCTCCGCCC GCCTTCGTCG CCGGGGCGCC CTGGCAGCTC
CCGCCGCGGC CGAGGCTGCA GACGATTCCC GAACTGATGC GCAACCGCCC GGCGGTGCTG
TTCCTCGCCG TCTGGTTCGT CACCAACCTG CTGTTCGGCG TCCTCGCGCT CCCGCTCGGA
GGCAATGAGG GGCCGATCGC CTGGGACGCG CATCTTGGCG GCTTTGCCGC CGGCTTCTTC
CTGCTGCCGC TGATGGAACG GGGTTCTATC CGTCCGCACG GATAA
 
Protein sequence
MDASPDLPHQ GRVPVFNLPG IVTISIAVLA AIHGLRSVLP DETDLSVLLN LAFIPARWTA 
AFDPGSAAEI IRAAGEGAGG AEIASARQDF ARYLVADPSS MPWTGATYAL LHGSWVHLIF
NAVWLAVFGT PVARRYGVLR YGLLALAGIV AGAVVHLLVD PYSLMPLVGA SAGISALMAA
AARFVFQPPP AFVAGAPWQL PPRPRLQTIP ELMRNRPAVL FLAVWFVTNL LFGVLALPLG
GNEGPIAWDA HLGGFAAGFF LLPLMERGSI RPHG