Gene Mpop_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2212 
Symbol 
ID6308754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2366308 
End bp2367420 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content74% 
IMG OID642650937 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001924909 
Protein GI188581464 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.284425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCG CCGACGCCGT CCGTTCTCCC ACCCCGGACG GGGGGGCCGA GGCCGGCCTT 
CTCGCCCTGC TCCCGCTGCC CGCGCTCATC CTGGAGGAGG CGGAGGCCGG ACCGACGATC
GCGGGCGTCA ACGCCGCCCT GCTGGCGCTG ACCGGCCTCG ACGAGGCCGC GTTGGTCGGC
CACGGGATCG AGGCCCTCGC CTGCCGCCAC GGCGATCATG CCGGCTGGCT CCCCTTGCGC
GAGGCGCTGG TCCGCGGCGA GACGGGTTGC TTCGAGCTGC TGTTCGCCCG CGGCACCGGC
GCCTCGTTCT GGGGCGAGAT CCACCTTGCC GCCCTGCCCG GCCCCACCCC GCGCCTCCTC
GGCCAGATCG TGGACGTGAC GCGGCGGCGC GACGCGGAGG ATGCCCTGGC CCTGTCGCGG
CAGCGGGAGG CGCTCGGGCT GCTGACCAAC AGCGTCGCGC ACGAGTTCAA CAACTTCCTG
CAGATCCTGA TCGGCTACAT CGACGGGCTG AAGCGGCGCC TCGGTGACCG GCCCGAGCCG
TTCATCCAGC GGGCCATCAC CCGCTCCACC GAAGCCTCGG AGCGGGCCGC GGTGCTCACC
CGCCAGCTCC TCGCCCATTC CCGGCGGATC GCTCCGGACG TCCGCCCGGT CGATCTCGGC
GCGGCGGTGC AGGCGGGCCT CGACCGGCTC CGCCCCACCC TGCCGCCGGG AATCGCGCTC
GACCTGTCGA TCCCGGAGGA TCTTCCGCCG GCCCTGTGCC ACCCGATCCA GCTCGAACTG
GCGCTCGGCC ACCTCCTCGC CAATGCCTGC GAGGCCATGG CGGGACAGGG CCGCATCCGC
GTGGCGCTGT TCGCCGTGGA ACCGGGGGAC CGCTCGCTGC AACGGCCGGA GGCCGGAGCG
GTCGGCCTCA CGGTGTCGGA TACCGGGCAC GGCCTGTCGC CGGAGATGCT GTCGCGGGCG
CTCGCCCCCT TCGCCACCAC CCGCGAATCC GGCCGTGGCG CCGGGCTCGC CATCGTCCAC
GGACTGATGA AGCGCCAGAA CGGCACGATC TCCATCGAGA GCCGTCCCGG CGAGGGCGCC
AGCGTGCGGC TGGTCTTCCC GGCCGCACGC TGA
 
Protein sequence
MMPADAVRSP TPDGGAEAGL LALLPLPALI LEEAEAGPTI AGVNAALLAL TGLDEAALVG 
HGIEALACRH GDHAGWLPLR EALVRGETGC FELLFARGTG ASFWGEIHLA ALPGPTPRLL
GQIVDVTRRR DAEDALALSR QREALGLLTN SVAHEFNNFL QILIGYIDGL KRRLGDRPEP
FIQRAITRST EASERAAVLT RQLLAHSRRI APDVRPVDLG AAVQAGLDRL RPTLPPGIAL
DLSIPEDLPP ALCHPIQLEL ALGHLLANAC EAMAGQGRIR VALFAVEPGD RSLQRPEAGA
VGLTVSDTGH GLSPEMLSRA LAPFATTRES GRGAGLAIVH GLMKRQNGTI SIESRPGEGA
SVRLVFPAAR