Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2156 |
Symbol | |
ID | 6314042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2306225 |
End bp | 2306758 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642650880 |
Product | nuclease (SNase domain protein) |
Protein accession | YP_001924853 |
Protein GI | 188581408 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.641386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGAA CGGGATTTTT CGGCCTCAGC CTCATCGCCC TTGCCGCGAC CGGGGCCATC GGCCCAGCCC AGGCCGGCGA GAGCGTGAGC GGACGGCCAC GCGTCCTGAG CGGCGACACG CTGGTGGTGG GCGGCCGCGT CGTGGGCCTC TACGGGGTGG CAGCGCCGGG CCTCAAGCAG ACCTGCCTGA ACGCCAAGGG CCAGAGCTAC GCCTGCGGCG CCCACTCGGC CCAGGCGCTC GCCGCCCATC TGCGGGACGC GAGCGTCACC TGTCAGATCC GCGAGACGGA CGTCTACGGT CGCGCCCTCT CCGTCTGCCA CCGGGACAAG GAAGACCTGA GCGCCTGGAT GGCGGAGAAG GGCCTCGTCA TGGCCGAACG CGGCGAGAAG GCGACCTATG TCGGCGCCGA GACCGTCGCC TGGGGCAAGC GCCTCGGCCT GTGGGCGGGT TCCTTCGAGG ACCCGACCGG GCGGCCGCGG ACGAGCTACT CGAAGGCCAG CACCGTGGCC GACGCCCAGC CCGAGACGCG CTGA
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Protein sequence | MRRTGFFGLS LIALAATGAI GPAQAGESVS GRPRVLSGDT LVVGGRVVGL YGVAAPGLKQ TCLNAKGQSY ACGAHSAQAL AAHLRDASVT CQIRETDVYG RALSVCHRDK EDLSAWMAEK GLVMAERGEK ATYVGAETVA WGKRLGLWAG SFEDPTGRPR TSYSKASTVA DAQPETR
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