Gene Mpop_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2121 
Symbol 
ID6313511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2282068 
End bp2283258 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID642650845 
Productelongation factor Tu 
Protein accessionYP_001924818 
Protein GI188581373 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.296933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGG AAAAGTTCTC CCGTAACAAG CCGCACTGCA ACATCGGCAC GATCGGACAC 
GTCGATCACG GCAAGACGTC GCTGACGGCG GCGATCACGA AGGTTCTGGC GGAGTCGGGC
GGCGCGACCT TCACGGCCTA CGACCAGATC GACAAGGCCC CCGAGGAGAA GGCGCGCGGC
ATCACGATCT CGACCGCCCA CGTCGAGTAC GAGACGACCA ACCGCCACTA CGCCCACGTC
GACTGCCCCG GCCACGCCGA CTACGTGAAG AACATGATCA CCGGTGCCGC CCAGATGGAC
GGCGCGATCC TGGTCGTGTC CGCCGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTCGCCC GCCAGGTCGG CGTGCCGGCG CTGGTGGTGT TCCTCAACAA GGTCGACATG
GTCGACGACG AGGAGCTCCT GGAGCTCGTC GAGCTGGAGG TGCGCGAGCT CCTCTCCAAG
TACGACTTCC CCGGCGACGA CATCCCGATC ACCAAGGGCT CGGCCCTGAT GGCGCTCGAG
GACAAGGAGC CGAAGATCGG CCGCGACGCC GTTCTGAAGC TGATGGAGAC GGTCGACGCC
TACATCCCGC AGCCGGAGCG TCCGATCGAC ATGCCGTTCC TGATGCCGAT CGAGGACGTG
TTCTCGATCT CGGGCCGCGG CACGGTGGTG ACGGGTCGTG TCGAGCGCGG CATCATCAAG
GTCGGTGAGG AAGTCGAGAT CGTCGGCATC CGCCCGACGA CGAAGACGAC GGTGACCGGC
GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGCCAGGCGG GCGACAACGT CGGCGTGCTG
CTGCGCGGCA CCAAGCGCGA GGACGTGGAG CGCGGCCAGG TCGTGTGCAA GCCGGGTTCG
GTGAAGCCGC ACTCGAAGTT CAAGGCCGAG GCCTACATCC TGACGAAGGA AGAGGGCGGC
CGCCACACGC CGTTCTTCAC CAACTACCGC CCGCAGTTCT ACTTCCGCAC GACGGACGTG
ACCGGCGTGT GCACGCTGCC CGAGGGCACC GAGATGGTGA TGCCGGGCGA CAACGTGACC
ATGGACGTGG TGCTGATCGT GCCGGTGGCC ATGGAAGAGA AGCTGCGCTT CGCCATCCGC
GAGGGTGGCC GCACCGTCGG TGCCGGCGTC GTCGCCGCCA TCAACGACTA A
 
Protein sequence
MGKEKFSRNK PHCNIGTIGH VDHGKTSLTA AITKVLAESG GATFTAYDQI DKAPEEKARG 
ITISTAHVEY ETTNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFLNKVDM VDDEELLELV ELEVRELLSK YDFPGDDIPI TKGSALMALE
DKEPKIGRDA VLKLMETVDA YIPQPERPID MPFLMPIEDV FSISGRGTVV TGRVERGIIK
VGEEVEIVGI RPTTKTTVTG VEMFRKLLDQ GQAGDNVGVL LRGTKREDVE RGQVVCKPGS
VKPHSKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVCTLPEGT EMVMPGDNVT
MDVVLIVPVA MEEKLRFAIR EGGRTVGAGV VAAIND