| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2051 |
|---|
| Symbol | |
|---|
| ID | 6314072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2203268 |
|---|
| End bp | 2204764 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642650775 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_001924749 |
|---|
| Protein GI | 188581304 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.608567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GTCACCTTCT CGCGCTCGGA TTGGGAGGAG CCACGATCGG CCTCCTCCTG
ATCGAGCCGT CGCTCGCGCA GTCGCCCGCG CCCGAGGCCA CCGCCGCTGC CGCCACTCCC
GTGCCCAACA AGGGTGACAC GGCCTGGATG CTGCTCTCGG CGATCCTCGT GCTGTTGATG
ACGGTGCCCG GTCTTGCCCT GTTCTACGGC GGCCTCGTCC GCACCAAGAA CATGCTCTCG
GTGCTGACCC AGGTCTTCGC CATCGCCTCG ATCGTCTGCC TCCTCTGGGT CACCTACGGC
TACAGCCTCG CCTTCACCAA TGGCGGCGGC CTCAACGACT TCGTCGGCGG CTTCTCCAAG
GCCTTCCTCA AGGGCGTCGA CGCCAATTCG GTGGCGGCGA CCTTCTCCAA CGGCGTCGTG
ATTCCCGAAT ACGTCTACAT CTGCTTCCAG ATGACGTTCG CGATGATCAC CCCCGGCCTC
ATCGTCGGCG CCTTCGCCGA GCGGATGAAG TTCTCGGCGC TGATCGTGTT CACGATCCTC
TGGGTCACGC TGATCTATTT CCCGATGGCC CACATGGTCT GGTACTGGGG CGGTCCCGAC
GTCTTCGCCG ACGCCGCCCG CAAGCTCGCC GCCGCCGGTG GCGAGGCCAA TGCCGCCGCC
AAGGCGGAGT ACGACGCCGT GCTGGGCGAC GCCGGCATGC TGTTCAAGTG GGGCGCCCTC
GACTTCGCCG GCGGCACCGT CGTGCACATC AACGCGGGTA TCGCCGGCCT CGTCGGCTGC
CTGATGCTCG GCAAGCGCAT CGGCTACGGC CGTGACTTGC TCGCCCCGCA TTCGCTGACC
ATGACCACGA TCGGCGCCTC GCTGCTCTGG GTCGGCTGGT TCGGCTTCAA TGCCGGCTCC
AACCTCGAAG CCAACGGCAC CACCGGTGTC GCGATGATCA ACACCTTCGT CGCCACCGCC
GCCGCGGCCG TCGCCTGGCT GTTCGTGGAA TGGGCTGCCA AGGGCAAGCC GTCGCTGCTC
GGCATGCTCT CGGGCGCCAT CGCCGGCCTC GTCGCCGTCA CCCCGGCCGC GGGCTTTGCC
GGCCCGATGG GCTCGATCGT TCTCGGCCTC GTCGCGGGTG CCGTCTGCTT CGTGATGTGC
TCCACCGTGA AGAACGCGCT CGGCTACGAC GACTCCCTCG ACGTCTTCGG CGTGCACTGC
GTCGGCGGCA TCATCGGCGC CATCGCCACC GGCATCCTGG TCTCGCCCGA TCTCGGCGGC
GCCGGCATCC CCGACTACAC CACCAAGCCC GGTGAACTCG TCCTCGGCAC CTACGACATG
GCCGCCCAGG TCATCACGCA GGCGAAGGCG GTCGGCTTCA CCATCCTGTG GTCGGGCATC
GGCTCGGCGA TCCTCTACAA GCTCGTCGAT CTCACGATCG GCCTGCGCGT GACGCAGGAA
GAGGAGCGCG AGGGCCTCGA CATCGCCGAT CACGGCGAGC GCGCCTACAA CTACTGA
|
|---|
| Protein sequence | MKLRHLLALG LGGATIGLLL IEPSLAQSPA PEATAAAATP VPNKGDTAWM LLSAILVLLM
TVPGLALFYG GLVRTKNMLS VLTQVFAIAS IVCLLWVTYG YSLAFTNGGG LNDFVGGFSK
AFLKGVDANS VAATFSNGVV IPEYVYICFQ MTFAMITPGL IVGAFAERMK FSALIVFTIL
WVTLIYFPMA HMVWYWGGPD VFADAARKLA AAGGEANAAA KAEYDAVLGD AGMLFKWGAL
DFAGGTVVHI NAGIAGLVGC LMLGKRIGYG RDLLAPHSLT MTTIGASLLW VGWFGFNAGS
NLEANGTTGV AMINTFVATA AAAVAWLFVE WAAKGKPSLL GMLSGAIAGL VAVTPAAGFA
GPMGSIVLGL VAGAVCFVMC STVKNALGYD DSLDVFGVHC VGGIIGAIAT GILVSPDLGG
AGIPDYTTKP GELVLGTYDM AAQVITQAKA VGFTILWSGI GSAILYKLVD LTIGLRVTQE
EEREGLDIAD HGERAYNY
|
|---|
| |