| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2045 |
|---|
| Symbol | |
|---|
| ID | 6313125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2196582 |
|---|
| End bp | 2197361 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650769 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_001924743 |
|---|
| Protein GI | 188581298 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.313627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.172176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTCGCT CGGAAGGCGC GCGGCAGATC GGGGACGCGG CGGGTGCCGC CCCCGAGGGA
GCGGCGCGGC CTGCGCCGCG GCACGTCGCC ATCATCATGG ACGGCAACGG CCGCTGGGCC
GCGAGCCGGG GCCTGCCCCG CTTCGAGGGG CACCGCCGCG GCGTCGAGGC GGTGCGCCGC
GCCGTGCGCT CCGCCATCAC GCTCGGCATC CACTATCTCA CCATCTACAG CTTCTCCTCG
GAGAACTGGC GCCGGCCGCC CTCAGAAATC TCCGAGCTGA TGGGCCTGCT CAAGCTGTTC
GTGCGCAGCG ACCTCGCCGA CCTGCACGCC AACAACGTCC GCGTCCGGGT GATCGGCGAC
CGGGCCGACC TCTCGGGGGA TATCGCCGGG CTGCTCGACG AGGCGGAGGC GCGCACCCGA
GCCAATACCG GCCTGACCCT GGTCGTCGCC TTCAACTACG GCGGCCGCCA GGAGATCCTG
CGCGCCGTGC GGCGCATCGC GGCGGCCGTT GCGGAGGGTC GTCTGCGACC TGAGGACATC
GACCTGCCGA CCATCACGGA GGCCCTCGAC ACCGCCGGCA TCCCCGATCC GGACCTCGTG
ATCCGGACCT CGGGCGAGCA TCGCCTCTCG AACTTCCTGA CGTGGCAGAC GGCTTATGCC
GAGTACGTGA TCGAGCCGGG CTTCTGGCCG GATTTCGACC ACGCCGCCTT CCTCGCCGCG
CTCGACGAGT ATCACCGCCG CGACCGCCGC TTCGGCGGCC TCAGCGCGGG GGCCGGTTGA
|
|---|
| Protein sequence | MVRSEGARQI GDAAGAAPEG AARPAPRHVA IIMDGNGRWA ASRGLPRFEG HRRGVEAVRR
AVRSAITLGI HYLTIYSFSS ENWRRPPSEI SELMGLLKLF VRSDLADLHA NNVRVRVIGD
RADLSGDIAG LLDEAEARTR ANTGLTLVVA FNYGGRQEIL RAVRRIAAAV AEGRLRPEDI
DLPTITEALD TAGIPDPDLV IRTSGEHRLS NFLTWQTAYA EYVIEPGFWP DFDHAAFLAA
LDEYHRRDRR FGGLSAGAG
|
|---|
| |