Gene Mpop_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2025 
Symbol 
ID6309777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2169781 
End bp2170893 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID642650749 
Productprotein of unknown function UPF0118 
Protein accessionYP_001924723 
Protein GI188581278 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.653838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGC GGGCAATCAT CGGGCTCTCG ATCCTCGCGG TGCTCGTCTT CCTGCTCTAC 
GAGCTGCGCG AGGTGATGCT GCCCTTCGTC GCCGGGCTCG CGCTCGCCTA CCTGCTCGAT
CCGCTGGCCG ACCGGCTGGA GCGCCTCGGT CTCGGCCGGC TCGCCGCGAC CCTGCTGATC
CTGGCCGGCT TCGTCGTCGG GCTCGTGGTG GTGCTCATCA TCGTCGTGCC GCTGGCCGCC
GGGCAGATCG CCTCCCTCGT CAATTCCCTG CCGACCATGG TCGGAAAGCT GCAGAGCATC
CTCGTCGAGC GCGCCGGGCC GTTGCTCCAG CGGATCGGCG GGGCGGAGGT CGTCAACGAG
CTCCAATCCT CCGTCGGCAC CCTGGTGGGG CAGGGGGGCA CGTGGTTCCT GGCCTTCCTC
AAGTCGCTCT GGACCGGGAG CCAGGCCCTC GTCTCCATCG CCTCGCTGCT CGTGGTGACG
CCGGTGGTTG CCTTCTACGT GCTGCACGAC TGGGACCGGA TGATCGCCAC GCTCGACGGC
TGGGTGCCGC CGCGCCACCG TCCCACCGCG CGGCGGCTCG CGGGCGAGAT CGACGGAGCG
GTCACGGGCT TCGTGCGCGG CCAGAGCCTC GTCTGCCTCA TCCTCGGTTC CTTCTACGCG
GTCGGCCTGT TCCTCGTCGG GCTGAACTTC GGCGTCTTGA TCGGGATGAT CTCGGGGTTC
CTCACCTTCA TCCCCTATGT CGGCACGCTC ACCGGCTTCA TGCTCTCGGT CGGCGTCGCC
CTGGTGCAGT GGTGGCCCAC CGGGGACTGG CTGCATATCG GGCTCACCGT CGGCGTGTTC
CTCGTCGGAC AGTTCCTGGA GGGCAACGTG ATCTCGCCCA AGCTCGTGGG CGACTCGGTC
GGCCTCCACC CGGTCTGGCT GATGTTCGCG CTGCTGGCTT TCGGCTCCCT GTTCGGCTTC
CTCGGGCTGC TGCTCGCGGT GCCGGTCGCC GCCTCCATCG GCGTCGTCGT CCGCTTCGGC
ATCGAGCGCT ACCTGGAGAG CAAGATCTAC CGCGGCGACG GGCCGGTGCT GATCGGGGAT
TCCGGGAACC CGACGCTGCC CGCCCGCGAT TGA
 
Protein sequence
MRGRAIIGLS ILAVLVFLLY ELREVMLPFV AGLALAYLLD PLADRLERLG LGRLAATLLI 
LAGFVVGLVV VLIIVVPLAA GQIASLVNSL PTMVGKLQSI LVERAGPLLQ RIGGAEVVNE
LQSSVGTLVG QGGTWFLAFL KSLWTGSQAL VSIASLLVVT PVVAFYVLHD WDRMIATLDG
WVPPRHRPTA RRLAGEIDGA VTGFVRGQSL VCLILGSFYA VGLFLVGLNF GVLIGMISGF
LTFIPYVGTL TGFMLSVGVA LVQWWPTGDW LHIGLTVGVF LVGQFLEGNV ISPKLVGDSV
GLHPVWLMFA LLAFGSLFGF LGLLLAVPVA ASIGVVVRFG IERYLESKIY RGDGPVLIGD
SGNPTLPARD