Gene Mpop_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2014 
Symbol 
ID6310022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2158159 
End bp2159229 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID642650738 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_001924712 
Protein GI188581267 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC GCGTTTGCAT CTCGCTCGAC GCCATGGGCG GCGATCACGG CCCCACGACC 
GTCGTGCCCG GCGCGGCGAT CGCCCGCGAG CGGCACCCCG AGCTCCATTT CATCCTGTTC
GGCGACGAAG CGGTGGTGCG CCCCCTCGTC GAGGCCGAGC CGCGCCTCAA GGGCGCCGTC
GAGATCCGCC ACACCACGGT CGCGGTCGCC ATGGACGACA AGCCGAGCCA GGCGGTGCGT
CAGGGGCGGG GCAAGTCCTC GATGTGGCGG GCGATCCAGG CCGTGCGCGA CGGCGAAGCC
CAGGCCGCGG TCTCCGCCGG CAATACCGGC GCCTTGATGG CGATGTCGAA GATCTGCCTG
AAGACCATGG CCGGGATCGA GCGCCCGGCC ATCGCCTGCC TCTGGCCGAC GGTGCGCGGC
GAGAGCGTGG TGCTCGATGT CGGCGCCACC ATCGGCACCG ATGCCGAGCA TCTGGTCGAG
ATGGCGGTGA TGGGCTCGGC CATGGCCCGG ATCGTCCTCG ACGTCGAGCG GCCAACGGTC
GGCCTGCTCA ATGTCGGCAC CGAGGAGATG AAGGGCAACG AGGCCGTGAA GGAGGCCGCC
CGCCTCCTGC GCGAGTCGGA GCCGGCGAAC TTCACCTATC ACGGCTTCGT CGAGGGCACC
GATCTCGGCC GCGGCACCAC CGACGTCGTG GTGACGGAGG GCTTCACCGG CAACATCGCC
CTCAAGACGG CGGAAGGCAC GGCCAAGCAG ATCGCCTCCT ACCTCAAGGC GGCGATGGGC
CGGACGCTGT CGGCCAAGAT CGGCTACCTG TTCGCGCGTC AGGCCTTCGC CGCCCTGCGC
GAGAAGATGA ATCCGAGCCG GGCCAATGGC GGTGTGTTCC TCGGGCTCGA GGGCATCGTC
ATCAAGAGCC ACGGCTCCGA GAACGCGCAA GGGTTTGCGG CCGCCGTCGA TCTTGCCCAC
GACATGGCCC GCCACGACCT GATGCGGACG ATTCGCGACA TGCTGGAGCA GACGCCGGCG
GTCGCCGCCG GGATGAGCGC CGGGCTCGAT GCCAGCTTGG CCCAGAAGTG A
 
Protein sequence
MSNRVCISLD AMGGDHGPTT VVPGAAIARE RHPELHFILF GDEAVVRPLV EAEPRLKGAV 
EIRHTTVAVA MDDKPSQAVR QGRGKSSMWR AIQAVRDGEA QAAVSAGNTG ALMAMSKICL
KTMAGIERPA IACLWPTVRG ESVVLDVGAT IGTDAEHLVE MAVMGSAMAR IVLDVERPTV
GLLNVGTEEM KGNEAVKEAA RLLRESEPAN FTYHGFVEGT DLGRGTTDVV VTEGFTGNIA
LKTAEGTAKQ IASYLKAAMG RTLSAKIGYL FARQAFAALR EKMNPSRANG GVFLGLEGIV
IKSHGSENAQ GFAAAVDLAH DMARHDLMRT IRDMLEQTPA VAAGMSAGLD ASLAQK