| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2003 |
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| Symbol | |
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| ID | 6308833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 2147309 |
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| End bp | 2148757 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642650727 |
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| Product | Homospermidine synthase |
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| Protein accession | YP_001924701 |
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| Protein GI | 188581256 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.205758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATG GTCCGCAGAA GGATTGGCCT GTCCACGGCC GCATCACCGG CCCGATCGTC
ATGATCGGTT TCGGTTCGAT CGGGCGGGGC ACCCTGCCCC TGATCGAGCG GCATTTCGAG
TACGACAAGA GCCGCTTCAC GGTCATCGAC CCCGTCGACA CCCATAAGGA TCTCGCCGAC
AAGCACGGCC TGCGCTTCGA GAAGGTCGCG CTCACCAAGG AGAACTACCG CGACGTCCTC
ACGCCGCTGC TCACCGAGGG CGGCGGCCAG GGCTTCTGCG TGAACCTGTC GGTCGACACC
TCCTCGCGCG ACATCCTCGA ACTCTGCCGC GAACTCGGCG CGCTCTACAT CGACACGGTG
GCCGAGCCCT GGGCCGGCTT CTACTTCGAC AAAGACCTGA GCCAGGCCGA CCGGACCAAC
TACGCGCTGC GCGAAAACAT CCTCGCCGCC CGCCGCGCCG CACCCGGCGG CCCGACGGCC
GTGTCGTGCT GCGGCGCCAA TCCCGGCATG GTCTCGTGGT TCGTCAAGCA GGCGCTCCTG
AACATCGCGG CGGATACCGG CTCGACCACG CCCGAGCCGA AGACCCGCGA GGACTGGGCC
GCGCTGATGC GTGAACTCGG CGTCAAGGGC GTCCACATCG CCGAGCGCGA CACCCAGCGC
GCCAAGTCCC CCAAGCCCCA GGGCGTGTTC GTCAACACCT GGTCGGTCGA GGGCTTCGTC
TCCGAGGGCA ACCAGCCGGC CGAGCTCGGC TGGGGCACGC ATGAGACCTG GAAGCCGGCC
AATGCCGAGG AGCAGACCAA GGGCTCGCGC TGCGCGATCT TCCTGCTCCA GCCCGGCGCC
GACACCCGCG TGCGCTCGTG GACCCCGACC GCGCAGGCGC AGTTCGGCTT CCTCGTGACC
CACAACGAGG CGATCTCGAT TTCGGACTAC TACACGGTGC GTGAGAACGG CGAGGCGGTC
TACCGCCCGA CCTGCCACTA CGCCTACCAC CCGGCCAACG ACGCCGTGCT CTCGCTGCAC
GAGATGTGGG GCAATGCTGG CAAGGTGCAG GAGCGCCAGC ACATTCTCGA CGAGAACGAG
ATCGTCGACG GCATCGACGA ACTCGGCGTG CTGCTCTACG GTCACAAGAA GAACGCCTAC
TGGTACGGCT CGCAGCTCTC CATTGAGGAG ACCCGCCGCG TCGCCCCCTA CCAGAACGCC
ACCGGCCTTC AGGTGACCTC GGCCGTGCTC GCCGGCATGG TCTGGGCGCT GGAGAACCCG
GAGGCGGGCA TCGTCGAGGC CGACGAGATC GACTTCCGCC GTTGCCTCGA AGTGCAGACG
CCGTATCTCG GCCCGGTGGT GGGCGTGTAC ACCGACTGGA CCCCGCTCAC GGACCGCCCC
GGGCTGTTCC CGGAGGACAT CGACCCGAGC GATCCTTGGC AGTTCCGCAA CGTGCTCGTG
CACGGCTGA
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| Protein sequence | MSDGPQKDWP VHGRITGPIV MIGFGSIGRG TLPLIERHFE YDKSRFTVID PVDTHKDLAD
KHGLRFEKVA LTKENYRDVL TPLLTEGGGQ GFCVNLSVDT SSRDILELCR ELGALYIDTV
AEPWAGFYFD KDLSQADRTN YALRENILAA RRAAPGGPTA VSCCGANPGM VSWFVKQALL
NIAADTGSTT PEPKTREDWA ALMRELGVKG VHIAERDTQR AKSPKPQGVF VNTWSVEGFV
SEGNQPAELG WGTHETWKPA NAEEQTKGSR CAIFLLQPGA DTRVRSWTPT AQAQFGFLVT
HNEAISISDY YTVRENGEAV YRPTCHYAYH PANDAVLSLH EMWGNAGKVQ ERQHILDENE
IVDGIDELGV LLYGHKKNAY WYGSQLSIEE TRRVAPYQNA TGLQVTSAVL AGMVWALENP
EAGIVEADEI DFRRCLEVQT PYLGPVVGVY TDWTPLTDRP GLFPEDIDPS DPWQFRNVLV
HG
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