Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1977 |
Symbol | |
ID | 6309928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2116492 |
End bp | 2117781 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642650701 |
Product | hypothetical protein |
Protein accession | YP_001924675 |
Protein GI | 188581230 |
COG category | [S] Function unknown |
COG ID | [COG4269] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.27072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.176782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAT TCGACGGTGT GCCGAGCCCG GCTCCGGCAC GAACGGGCGA CATCGCGTTC GACCGGCGGA CACAGGGGCT GACCGGCATC GTGGTCAAGG GCTTCCTGCT CTCGCTGGTG ACCTTCTCGA TCTACCGGTT CTGGTACATC ACCAACCTGC GGCGCTACTT CTGGAGCCGC ACCGTCGTGG CCGGCAGCCC GGCCGAGTAT CTCGGAAACG GCAAAGAGCT CTTTCTCGGC TTCCTCGTCG CGCTCGCTGT TCTGGTGCCG GTCTACATCG TCCTGTTCGT CGTCGGATTG CTGAGCCCGA TCCTGGCCAC GCTCGCCGCG CCGATCTCCT TCATCGGCCT GTTCGTGCTC GGGCAATACG CGCTGTTCCG CGGCCGGCGA TACCGGGCCT CGCGCACGCG CTGGCGCGGC ATCCGCCTGG GTCAGGACGG GTCGGGCTTC GCCTATGCGG GCCTCGCCAG CCTGTGGTGG CTCGGGACGA TCCTCAGCCT CGGCCTGGCC TTCCCCTTCA TGCGTGCGGC GCTGGAGCGC TACCGCATCG ACCACACCCT GGTCGGCCAG AGCCGGATGC GCTCGACCGC GACGGGGCGT TCGATCCTGC TGCCCTGGAT GATGTTCTAC ATCGTCGCGC TGCTGCCGAC CCTGCTGAGC ATCCTGGCGC TGCTGGCAGC GACCGGCTTC GACATCCCCA GCGACCTGCT GATCCAGGAT CCGGCGAACG AGAAGAGCAA TTTCGTCTTC AACCCGGCCT ACGAGGACAC CCCGTTCGCC TCCTACGGCG CCGCCGTCGT GATCGCCACC TCCGTCTCGA TCCCGCTGGC GCTGCTGCTG ATTCCCTATT ACCGGGCCCG CGAGACCCGC GCCTTTTTCA ACGCGGCCCA TCTCGGCGAG GCGCGGCTGA CCTCCTCGCT CAAGGCCCGT CGGTTCTACG TCCCCTACCT CGTCTACATG CTGGCGGTGA TCGGCTTCAT CCTCGTGCTG GGCATCATCT TCGCCCTGCT CGTGCCGCTA ATTGCTACGG ACGGGCAGAA TCCCGGCATC CACGCCTTCG TCATCGCCTC GACCGTGCTG CTCTATCTCG GCGCGATCCT CGGCACGAAC GTGCTCTACG TCCGCATCGT CACCGTACGC CTGTGGCACG CGGTGGCGAC GACGACGCAG ATCGAGAACC TGCCGGCGCT GGAAGCGGTG CTCGCCTCGA CCCGCGCCCC GGCCAGCGGC CTCAACGAGG GACTGGCCGA CGCGCTCGAT GTCGGCGGCG CCCTCGAGAT CGGGTTCTAG
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Protein sequence | MNQFDGVPSP APARTGDIAF DRRTQGLTGI VVKGFLLSLV TFSIYRFWYI TNLRRYFWSR TVVAGSPAEY LGNGKELFLG FLVALAVLVP VYIVLFVVGL LSPILATLAA PISFIGLFVL GQYALFRGRR YRASRTRWRG IRLGQDGSGF AYAGLASLWW LGTILSLGLA FPFMRAALER YRIDHTLVGQ SRMRSTATGR SILLPWMMFY IVALLPTLLS ILALLAATGF DIPSDLLIQD PANEKSNFVF NPAYEDTPFA SYGAAVVIAT SVSIPLALLL IPYYRARETR AFFNAAHLGE ARLTSSLKAR RFYVPYLVYM LAVIGFILVL GIIFALLVPL IATDGQNPGI HAFVIASTVL LYLGAILGTN VLYVRIVTVR LWHAVATTTQ IENLPALEAV LASTRAPASG LNEGLADALD VGGALEIGF
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