| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1968 |
|---|
| Symbol | |
|---|
| ID | 6312727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2104388 |
|---|
| End bp | 2106871 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642650692 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001924666 |
|---|
| Protein GI | 188581221 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.140835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0336357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCGC TACTCCGGGC GCCGGCCGCG ATGCCGCTCG TCATCCTGGC CCTGACGCTC
GCGGGCCTCG GCCTCGTCGC AGGGACGAGC GGCTACAGCC ACTTCGTCAT CGCGCTCGTC
GCGCTGACGG TGGTGGCCGG CACCGGCCTC AACGTCCTGC TCGGGCTCGG CGGACTGATC
TCCTTCGGCC ATGCCGGGTT CTACGCGATC GGCGCCTATA CGAGCGCGAT CCTGACGCTG
AAGGGCGTGA GCTTCTGGCT GGCGCTGCCG GCCGCTTCCG GGCTCTCCGC CCTCGTCGGC
GCGGCGCTCG CCGTGCCGGC GATGCGGGTG CGCGGGCCCT ACCTCGCCAT GGTGACGATC
GCCTTCGGCT TTCTGGTCGA GCACGCGCTG ATCGAGGGCG GGGAACTCAC CGGCGGCCAG
AACGGCCTCG TGGTCGCCAC CGGCCCGAGC CTGTTCGGGC TCCCGCTGGC CGAGCGCGAC
CTCGCTTGGC TCGCGGTGAT CGGGGCGGGC CTCAGCCTCT ACGGCTTCCA CCGGCTGCGC
CATGCCCGTC TCGGTCAAGC CCTGCGCGCG GTGCGCGACG CGGATGTCGC CGCCGCCTCG
CTCGGCTTCG ATCCGGTCCG GGTGAAGACC GCCGCCTTCG CGATCTCGGC GGCGCTGACC
GGGCTGGCCG GCGCGGTGCT GCCGCCGCTG ATGCTGTTCA TCGCACCGAG TTCGTTCCCG
TTCACGCAGT CGATCCTGTT CGTCCTCGCG GTGGTGGTCG GCGGGGCCGG AACCGTGCTC
GGGCCGCTGT TCGGCGCGCT GGTGACGGTG CTGCTGCCCG AGGCGCTGGC GGGGCTGGCC
GAATACCGGC TGCTGTTCTT CGGCCTGACC ACCCTGGTGG TGCTCTGGCT CGTGCCGGCG
GGTCTCGTCG GCAGCCTCGC TCGCCTGCTG CCGCGGAGCG CTGCGGCTCG TTCCGAGGCG
CACGGCGAGG CCCCGGACTT CCTGCGGCGG AGCGAGGGCG CGCCGCTCGC CGTCGAGGGG
CTCGGCATCG CCTTCGGCGG CATCAAGGCG GCGGAGGGCG TCGCCTTCGA GGCGCGACCC
GGCGCGATCA CCAGCGTGAT CGGTCCGAAC GGGGCCGGCA AGACCACCGT CCTCAACATG
ATCTCCGGCT TCTACCGGCC GAGCGCCGGC ACGATCCGCC TGGGGGAGCG TGAACTGGGC
GGCCGGCCCG CCCATGCCAT CGCCCGCGCC GGCATCGCCC GCACCTACCA GACGACGCGG
CTGTTCGGCT CGCTCAGCGT CGTGGAGAAC GTGATCCTCG CCCGCGCCCC CGGCCGCCTG
CTGCGCCGGG CGCAGGCGCG GGACCGCGAG GCGGCCGCGG CCCTGCTCGC CTTCGTCGGC
TATGCCGGCG CCCTCGACCG GCCGGCCGCC GAGCTGCCCC ATGTCGACCG GAGGCTGGTG
GAGATCGCCC GCGCGCTGGC CGGGTCCCCG CAGGTGCTGC TCCTCGACGA GCCGGCCGCC
GGCCTCGCCC GCGCCGAGAC CGACCGCCTC GGCGTGCTGC TGCGCCGGAT CGCGGCCTGC
GGCATCGCGG TGATCCTCGT CGAGCACGAC ATGCCCCTGG TGATGGGCGT GTCCGACCGC
ATCCTCGTCA TGGATGCCGG CCGCCCGATC GCCCGCGGCA CCCCCGCCGA GGTACGCCGC
GACCCGGCCG TGCTGCGGGC CTATCTCGGC GCCGCCGAGA CCCCGGCCCG GCCGCGCTCC
GCCCCCTGGA GCGGCCCGGC CGACGCGGTT CTGGCCGCCC ACGGCCTCAG CGCGGGCTAC
GGCGCCGCGC CCGTGCTCGA TCGCCTTGCA CTCGCGGTGC GGCCCGGCGA GACCGTGGCG
CTGCTCGGCT CGAACGGGGC CGGCAAATCG ACGGCGATGC GGGCGCTCGC GGGCCTGCTG
CGTCCGGTCG AGGGCTCGGT GGTGCTGGCC GATGCCCCGA TCGCGGCGCT GCCGGCGCAT
CGGATCGCGC GCCTCGGCCT CGCTCTGGTG CCGGAAGGGC GGCAGGTCTT TCCCGAACTC
ACCGTCGTCG AGAACATCCG CCTCGGCGCC TGGAGTCGGT CCGGGAGCCG CAGCGGACGG
GTCGATCCGG CGGAGGTCGA GGCGTTGCTC GACCGGTTCC CGCGCCTGCG CGAGCGGGCG
GGCAGCCGCG CCGGCCTGCT CTCGGGCGGA GAGCAGCAGA TGCTCGCGAT CGCCCGCGGG
ATGATGGCGC GCCCGCGCAT CCTCCTGCTC GACGAGCCTT CCCTCGGCCT CGCCCCCGCG
ATCATCAACA GCCTCTACGC CACCGTCGCC GAACTGCGCG ACCAGGGCAT CACGATCCTC
ATCGTCGATC AGATGGCCGC GCTGGCGCTG ACCGTGGCGG ACCGCGGCTA CGTCCTGGAG
CAGGGGCGCG TCGCCGCCTC CGGCACCGCG GCGGAGCTCA AGGCGGACGC CGCGCTCGAG
GCGGCCTATC TCGGGGCGGC GTGA
|
|---|
| Protein sequence | MGSLLRAPAA MPLVILALTL AGLGLVAGTS GYSHFVIALV ALTVVAGTGL NVLLGLGGLI
SFGHAGFYAI GAYTSAILTL KGVSFWLALP AASGLSALVG AALAVPAMRV RGPYLAMVTI
AFGFLVEHAL IEGGELTGGQ NGLVVATGPS LFGLPLAERD LAWLAVIGAG LSLYGFHRLR
HARLGQALRA VRDADVAAAS LGFDPVRVKT AAFAISAALT GLAGAVLPPL MLFIAPSSFP
FTQSILFVLA VVVGGAGTVL GPLFGALVTV LLPEALAGLA EYRLLFFGLT TLVVLWLVPA
GLVGSLARLL PRSAAARSEA HGEAPDFLRR SEGAPLAVEG LGIAFGGIKA AEGVAFEARP
GAITSVIGPN GAGKTTVLNM ISGFYRPSAG TIRLGERELG GRPAHAIARA GIARTYQTTR
LFGSLSVVEN VILARAPGRL LRRAQARDRE AAAALLAFVG YAGALDRPAA ELPHVDRRLV
EIARALAGSP QVLLLDEPAA GLARAETDRL GVLLRRIAAC GIAVILVEHD MPLVMGVSDR
ILVMDAGRPI ARGTPAEVRR DPAVLRAYLG AAETPARPRS APWSGPADAV LAAHGLSAGY
GAAPVLDRLA LAVRPGETVA LLGSNGAGKS TAMRALAGLL RPVEGSVVLA DAPIAALPAH
RIARLGLALV PEGRQVFPEL TVVENIRLGA WSRSGSRSGR VDPAEVEALL DRFPRLRERA
GSRAGLLSGG EQQMLAIARG MMARPRILLL DEPSLGLAPA IINSLYATVA ELRDQGITIL
IVDQMAALAL TVADRGYVLE QGRVAASGTA AELKADAALE AAYLGAA
|
|---|
| |