Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1950 |
Symbol | |
ID | 6308973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2082648 |
End bp | 2084030 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642650674 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001924648 |
Protein GI | 188581203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.145818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC GGTGGACCCC GAAAACCTGG CGCAACCTGC CGATCCAGCA GGTTCCGTCC TATCCGGACG CGTCCGCGCT CCAGGCCGTC GAGGCGCAGC TCGCGAGCTT TCCGCCGCTG GTGTTTGCCG GTGAGGCCCG CAAGCTGAAG GCGGCGCTGG CGCGCGTCGG AGCGGGCGAA GCCTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG ACGAGCATTC GGCCGACAAC ATCCGCGATT TCTTCCGCGT CTTCCTGCAG ATGGCGATGG TGCTCACCTT CGCGGGCGGC TCGCCCGTGG TGAAGGTCGG CCGCATCGCC GGGCAGTTCG CCAAGCCGCG CTCCTCGCCG ACCGAGACGC TCGACGGGGT GGCGCTGCCG AGCTACCGCG GCGACATCAT CAACGGCCTG ACCTTCACCG AAGAGGCCCG GATCCCCGAT CCGAAGCGCC AGCTCGAGGC CTACCGGCAG TCGGCGGCGA CGCTGAACCT GCTGCGCGCC TTCGCCACCG GCGGCTACGC CAACCTCGAG AACGCGCATC GCTGGATGCT CGGCTTCGTC AAGGACAGCC CGCAATCCTC GCGCTACCGC GACGTGGCGG AGCGGATGTC GGACGCGCTC GACTTCATGC GCGCCATCGG CATCAATCCG GAGACGCACC AGGAGGTCCG CACCACGGAT TTCTACACCA GTCATGAGGC GCTGCTGCTC GGCTACGAGG AGTCGCTCAC CCGCGTCGAT TCGACGAGCG GCGACTGGTA CGCCACGTCC GGCCACATGC TCTGGATCGG CGACCGCACC CGCCAGCCGG ACCACGCCCA CGTCGAGTAC GCCCGCGGCA TCAAGAACCC GATCGGCCTC AAATGCGGGC CCTCGACCAC GGCCGAGGGG CTGATCCGGC TGATCGATCT GCTCAATCCG GAGAACGAGG CCGGCCGCCT CAGCCTGATC TGCCGCTTCG GCGCGGATAA GGTCGGCGAT CACCTGCCGA ACCTGATCCG CACGGTGCAG CGCGAGGGCC GCAACGTGGT GTGGGTCTGC GACCCGATGC ACGGCAACAC CATCGCCGCG GGCCGCTACA AGACCCGGCC GTTCGAGCGG GTGATGCAGG AGATCGAGGG CTTCTTCGGC GTGCATCGCG CGGAGGGCAC GATCGCCGGC GGCATCCATC TCGAGATGAC CGGCAAGGAC GTCACCGAAT GCACCGGCGG CGCCCGGGCG CTGACGGCCG ACGACCTGCA GGACCGCTAC CACACCTATT GCGACCCGCG CCTCAATGCG GAGCAGGCGC TGGAAGTGGC CTTCCTCACC GCGGAGCTGG TCAAGCGCGA GCGCGCCGAG ATCGAGCGCC CGCGCCTCGA CGCGGCAGAA TAG
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Protein sequence | MAERWTPKTW RNLPIQQVPS YPDASALQAV EAQLASFPPL VFAGEARKLK AALARVGAGE AFLLQGGDCA ESFDEHSADN IRDFFRVFLQ MAMVLTFAGG SPVVKVGRIA GQFAKPRSSP TETLDGVALP SYRGDIINGL TFTEEARIPD PKRQLEAYRQ SAATLNLLRA FATGGYANLE NAHRWMLGFV KDSPQSSRYR DVAERMSDAL DFMRAIGINP ETHQEVRTTD FYTSHEALLL GYEESLTRVD STSGDWYATS GHMLWIGDRT RQPDHAHVEY ARGIKNPIGL KCGPSTTAEG LIRLIDLLNP ENEAGRLSLI CRFGADKVGD HLPNLIRTVQ REGRNVVWVC DPMHGNTIAA GRYKTRPFER VMQEIEGFFG VHRAEGTIAG GIHLEMTGKD VTECTGGARA LTADDLQDRY HTYCDPRLNA EQALEVAFLT AELVKRERAE IERPRLDAAE
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