Gene Mpop_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1950 
Symbol 
ID6308973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2082648 
End bp2084030 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID642650674 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001924648 
Protein GI188581203 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.145818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC GGTGGACCCC GAAAACCTGG CGCAACCTGC CGATCCAGCA GGTTCCGTCC 
TATCCGGACG CGTCCGCGCT CCAGGCCGTC GAGGCGCAGC TCGCGAGCTT TCCGCCGCTG
GTGTTTGCCG GTGAGGCCCG CAAGCTGAAG GCGGCGCTGG CGCGCGTCGG AGCGGGCGAA
GCCTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG ACGAGCATTC GGCCGACAAC
ATCCGCGATT TCTTCCGCGT CTTCCTGCAG ATGGCGATGG TGCTCACCTT CGCGGGCGGC
TCGCCCGTGG TGAAGGTCGG CCGCATCGCC GGGCAGTTCG CCAAGCCGCG CTCCTCGCCG
ACCGAGACGC TCGACGGGGT GGCGCTGCCG AGCTACCGCG GCGACATCAT CAACGGCCTG
ACCTTCACCG AAGAGGCCCG GATCCCCGAT CCGAAGCGCC AGCTCGAGGC CTACCGGCAG
TCGGCGGCGA CGCTGAACCT GCTGCGCGCC TTCGCCACCG GCGGCTACGC CAACCTCGAG
AACGCGCATC GCTGGATGCT CGGCTTCGTC AAGGACAGCC CGCAATCCTC GCGCTACCGC
GACGTGGCGG AGCGGATGTC GGACGCGCTC GACTTCATGC GCGCCATCGG CATCAATCCG
GAGACGCACC AGGAGGTCCG CACCACGGAT TTCTACACCA GTCATGAGGC GCTGCTGCTC
GGCTACGAGG AGTCGCTCAC CCGCGTCGAT TCGACGAGCG GCGACTGGTA CGCCACGTCC
GGCCACATGC TCTGGATCGG CGACCGCACC CGCCAGCCGG ACCACGCCCA CGTCGAGTAC
GCCCGCGGCA TCAAGAACCC GATCGGCCTC AAATGCGGGC CCTCGACCAC GGCCGAGGGG
CTGATCCGGC TGATCGATCT GCTCAATCCG GAGAACGAGG CCGGCCGCCT CAGCCTGATC
TGCCGCTTCG GCGCGGATAA GGTCGGCGAT CACCTGCCGA ACCTGATCCG CACGGTGCAG
CGCGAGGGCC GCAACGTGGT GTGGGTCTGC GACCCGATGC ACGGCAACAC CATCGCCGCG
GGCCGCTACA AGACCCGGCC GTTCGAGCGG GTGATGCAGG AGATCGAGGG CTTCTTCGGC
GTGCATCGCG CGGAGGGCAC GATCGCCGGC GGCATCCATC TCGAGATGAC CGGCAAGGAC
GTCACCGAAT GCACCGGCGG CGCCCGGGCG CTGACGGCCG ACGACCTGCA GGACCGCTAC
CACACCTATT GCGACCCGCG CCTCAATGCG GAGCAGGCGC TGGAAGTGGC CTTCCTCACC
GCGGAGCTGG TCAAGCGCGA GCGCGCCGAG ATCGAGCGCC CGCGCCTCGA CGCGGCAGAA
TAG
 
Protein sequence
MAERWTPKTW RNLPIQQVPS YPDASALQAV EAQLASFPPL VFAGEARKLK AALARVGAGE 
AFLLQGGDCA ESFDEHSADN IRDFFRVFLQ MAMVLTFAGG SPVVKVGRIA GQFAKPRSSP
TETLDGVALP SYRGDIINGL TFTEEARIPD PKRQLEAYRQ SAATLNLLRA FATGGYANLE
NAHRWMLGFV KDSPQSSRYR DVAERMSDAL DFMRAIGINP ETHQEVRTTD FYTSHEALLL
GYEESLTRVD STSGDWYATS GHMLWIGDRT RQPDHAHVEY ARGIKNPIGL KCGPSTTAEG
LIRLIDLLNP ENEAGRLSLI CRFGADKVGD HLPNLIRTVQ REGRNVVWVC DPMHGNTIAA
GRYKTRPFER VMQEIEGFFG VHRAEGTIAG GIHLEMTGKD VTECTGGARA LTADDLQDRY
HTYCDPRLNA EQALEVAFLT AELVKRERAE IERPRLDAAE