| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1939 |
|---|
| Symbol | |
|---|
| ID | 6309071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2073250 |
|---|
| End bp | 2074545 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650663 |
|---|
| Product | Histidinol dehydrogenase |
|---|
| Protein accession | YP_001924637 |
|---|
| Protein GI | 188581192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0835153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC TCGACAGCCG CTCCCCCGAA TTCGGGGAGG CGTTCAAGCG CCTGCTCGGC
CTCAAGCGCG AGATCTCGCA GGACGTGGAC GAGACCGTGC GCGGCATCAT CGCGGGCGTC
GTCTCCGGCG GCGATGCGGC GCTCGTCGAG TACACCCGCC GCTTCGACCG GCTCGGCCAG
GACTTTTCGC CCGCCGCGCT CCGCATCACG GCCGAGGAGG TGGAGGCGGC CGTCGCCGCC
TGCCCCCCTG AAGCCCGCGC CGCCCTGGCG CTCGCCGCCG AACGGATCGA GGCGTTCCAC
CGCCGCCAGA TCCCCGAGGA CCACCTCTCC ACCGACGATC TCGGCGTCAC CGCCGGCTGG
CGCTGGACCG CGCTCGAATC CGTCGGCCTC TACGTCCCCG GCGGCACCGC GAGCTATCCG
TCCTCGGTGC TGATGAACGC GGTGCCGGCG CGGGTGGCCG GCGTGCCGCG CATCGTCATG
GTGGTGCCCA CCCCCGAGGG CCAGCTCAAC CCGCTGGTGC TGGCCGCCGC GCAGCTCTCG
GGCGTCACCG AGATCTACCG GGTCGGCGGA GCGCAGGCGG TGGCCGCGCT CGCCTACGGC
ACGCAAACCA TCGCGCCGGT GGCCAAGATC GTCGGCCCCG GCAATGCCTG GGTCGCCGCC
GCCAAGCGCC GGGTGTTCGG GCAGGTGGGC ATCGACATGA TCGCCGGCCC CTCCGAGGTG
CTGATCCTGG CCGACGGTCA CGCCAATCCC GACTGGATCG CCGCCGACCT CCTGGCCCAG
GCCGAGCACG ACGAGGCGGC GCAGTCCGTG CTCATCACCG ATTCGGACGA CCTGGCCGAG
GCGACGGAGG CGGCGGTGGA GCGCGCCCTG ACGACCCTGA AGCGGGAAAA GATCGCCCGC
GCCAGCTGGC GCGATTACGG CGCGATCATC CGCGTCCGCG ATTTCGACGA GGCGGTGCCG
CTGGTCGACG CCATTGCCCC CGAGCATCTC GAGATCGAGA CCGAGGATGC CGAGGCGCTG
TCGCGGAAAA TCCGGAATGC GGGGGCGATC TTCCTCGGCG CGCACACGCC GGAAGCCATC
GGCGACTATG TCGGCGGCCC GAACCACGTG CTGCCGACCG CCCGCTCGGC GCGGTTCTCC
TCGGGGCTCG GGGTGCTCGA CTTCATGAAG CGCACCTCGA TCCTGCGCTG CGATCCGGCC
GCCCTGCGGG CGCTCGGCCC CGCCGCGATC GCGCTGGGCG AATCGGAGGG CCTCGACGGG
CATGCCCGCT CCGTGGCGAT CCGGCTCAAC CTCTGA
|
|---|
| Protein sequence | MIRLDSRSPE FGEAFKRLLG LKREISQDVD ETVRGIIAGV VSGGDAALVE YTRRFDRLGQ
DFSPAALRIT AEEVEAAVAA CPPEARAALA LAAERIEAFH RRQIPEDHLS TDDLGVTAGW
RWTALESVGL YVPGGTASYP SSVLMNAVPA RVAGVPRIVM VVPTPEGQLN PLVLAAAQLS
GVTEIYRVGG AQAVAALAYG TQTIAPVAKI VGPGNAWVAA AKRRVFGQVG IDMIAGPSEV
LILADGHANP DWIAADLLAQ AEHDEAAQSV LITDSDDLAE ATEAAVERAL TTLKREKIAR
ASWRDYGAII RVRDFDEAVP LVDAIAPEHL EIETEDAEAL SRKIRNAGAI FLGAHTPEAI
GDYVGGPNHV LPTARSARFS SGLGVLDFMK RTSILRCDPA ALRALGPAAI ALGESEGLDG
HARSVAIRLN L
|
|---|
| |