| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1937 |
|---|
| Symbol | |
|---|
| ID | 6309069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2071882 |
|---|
| End bp | 2072355 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642650661 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001924635 |
|---|
| Protein GI | 188581190 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0397602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG ACGCGATCCC GGGGACCGGG CCGAAGAAGC GGCGGGTTCA GTCCGTCCTG
TTCATGTGCA ATTTCAACGC GGTGCGCTCC CTGGCGGCGG AGGCGATCGC GCGCCACTAT
TTCGGAAAGT CCACCTACGT GCAGTCGGCC GGCGTGCGCT CGGGCGAGCC GAGTGACCCC
TTCATGGTCG CGGCGCTGGA CGAGATCGGC ATCGACGCCT CCCGCCACAA GCCGCGCACC
ATCGAGCAGC TGGAGGATTG GGAGGGGCTG AACTTCGACC TGATCATCAC CCTCTCGCCG
GAGGCGCACC ACCGCGCCCT CGAACTGACC CATACCCTCG CGGCGGATGT CGAGTACTGG
CCGACGCCGG ATCCGACGCT GGTGCAGGAC GGGACGCGCG AGCAGCGCCT CGACGGCTAC
CGCGACGTGC GCGACGGGCT CACCTACCGG ATCAAGTCCC GGCTGAAGGG CTGA
|
|---|
| Protein sequence | MTDDAIPGTG PKKRRVQSVL FMCNFNAVRS LAAEAIARHY FGKSTYVQSA GVRSGEPSDP
FMVAALDEIG IDASRHKPRT IEQLEDWEGL NFDLIITLSP EAHHRALELT HTLAADVEYW
PTPDPTLVQD GTREQRLDGY RDVRDGLTYR IKSRLKG
|
|---|
| |