| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1919 |
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| Symbol | |
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| ID | 6313097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2053611 |
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| End bp | 2054471 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642650643 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001924617 |
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| Protein GI | 188581172 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.187033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGA TGACGCTGGA CGGACGCAAG GCGAGGCTGA TCGGGGCCGT CGCGCTGACG
GCCGCGGCGC TGGCCGGCTG CGAGACCTAT GGCAGCGCGT CCGCCCCGCG CCAGTTCGCG
GTGCTGGAGA CCGACACCAC GGGCGCCACC AACGTCAACA TCGCCTCGCT CAGCGACGTG
ATCTCCCGCA ACCCGTCGGA TGCCGGCGCC TACGTCACCC GCGGCGCCGC CTATGCCCGT
TCGGGGCAGT TCGGCGAGGC GATCAGCGAC TTCTCGAAGG CGATCCAGCT CGATCCGAAC
TCGGCCTCGG CCTACAACAA CCGGGCGCTG GCCTACCGCC AGACCGGCCG CAACGATGCG
GCGATGCAGG ATTTCTCGAA GGCGATCGCC ACCGATCCGA ACTTCTCCGC CGCCTATATC
GGCCGGGCGA ACCTGGAACG CGCCCAGGGC GATCTCAACG GCGCGCTCAA CGACCTCAAC
GTCGCAATCC GCCTCGCCCC CGAATCGGCC GAGGCCTACC ACGCCCGCGG CCTCGTGCGG
CAGAAGCAGG GGCAGAACCC GGAGGCGATC GGCGACTTCG CCGCGGCCAT CGACCGCAAC
CCCTTCGTCG CCGCCCCCTA CGCCGCCCGC GGCCAGAGCC TGATCTCGCT GAACCAGTAC
GACAAGGCGA TCGAGGACTT CAACGCGGCG CTGAACGTGA ACTCGAAGGA CGCCTCGTCC
TGGGCCTATC GCGGGCTGGC CTACGAGAAG ACGAACCGCC GCAAGGAGGC GAACGAGAGC
TACCAGCAGG CGGCCCGCCT CGATCCCAAC AACGCCGTGG CCAAGCAGGG CGTCGGCCGC
ATGCAGGGCG GCCTGTTCTA G
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| Protein sequence | MIGMTLDGRK ARLIGAVALT AAALAGCETY GSASAPRQFA VLETDTTGAT NVNIASLSDV
ISRNPSDAGA YVTRGAAYAR SGQFGEAISD FSKAIQLDPN SASAYNNRAL AYRQTGRNDA
AMQDFSKAIA TDPNFSAAYI GRANLERAQG DLNGALNDLN VAIRLAPESA EAYHARGLVR
QKQGQNPEAI GDFAAAIDRN PFVAAPYAAR GQSLISLNQY DKAIEDFNAA LNVNSKDASS
WAYRGLAYEK TNRRKEANES YQQAARLDPN NAVAKQGVGR MQGGLF
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