Gene Mpop_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1828 
Symbol 
ID6312717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1965619 
End bp1966494 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content72% 
IMG OID642650551 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_001924526 
Protein GI188581081 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGC GTCGGCTCGT TCCCGCCTTT TTCCTCCTCG TCACCGCTCC GGCGACCTCG 
CCTCAGGCCC TGTCGGACGC GCCCGCCTGC CCCGCCCTGT TCGCGGAAGG CCGAGCGCCG
GCTCTCGTCA ACCCGAAGCT CGCGGACAGA GCCGTCCCGC TCTGTTTCGA GGCCTTCGCC
GTGCTGCATT CGGGCGCGTC GCGCACGCCG CTCTACGCCG CGGAGCGCCT GACGCGCTGG
AGCGTGTCCG CCGCCCGCCG GGTCGAGCGC GCCGACGCCT TCCACGACGA GGATCGCCTA
CCCGAGGACG ACCGCGCGAG CCTCGCCGAC TATGTCCGCA GCGGCTACGA CCGCGGCCAT
CTCGCGCCCG CCGGCGACAT GCCGAGCGCG ACCGCCCAAG CCGAATCGTT CAGCCTCGCC
AACATCGTGC CCCAGAACCG GTCGGTGAAC CGCGGCCTGT GGGCAGCGAT CGAGGAGAGC
GTGCGCCGGC TCGCCACCGA GCGCGGCGAA CTCTTCGTCG TGACCGGGCC GATCTTCGAG
GGCCGCTCGG TCGGCGCGAT CAAGGGGCGG GTGCTGGTGC CGACCCAGCT CTTCAAGGCG
ATCTACGACC CGCGCACCGG CGAGGCGGGC GCCTATCTCG TGGCGAACGC GTCGGGGGCC
GAGTGGCACG CGGTCTCGCT CGCGGCCCTG CGCGACCGGA CCGGGCTCGA CGTGTTCCCG
GCGCTGCCGG ACGCGGCCAA GGCCAAGGCG ATGCCCCTGC CCGAGCCTCA CGAATTTTCC
CGGGATCGCC AGGAATCCTT CGCCGACTTC CTGAAGCAAC TCGCCGTCGA CATCCTACGC
CGGCTCTGGC GCGAGTTGAT GCGCGCGATC TTCTGA
 
Protein sequence
MVLRRLVPAF FLLVTAPATS PQALSDAPAC PALFAEGRAP ALVNPKLADR AVPLCFEAFA 
VLHSGASRTP LYAAERLTRW SVSAARRVER ADAFHDEDRL PEDDRASLAD YVRSGYDRGH
LAPAGDMPSA TAQAESFSLA NIVPQNRSVN RGLWAAIEES VRRLATERGE LFVVTGPIFE
GRSVGAIKGR VLVPTQLFKA IYDPRTGEAG AYLVANASGA EWHAVSLAAL RDRTGLDVFP
ALPDAAKAKA MPLPEPHEFS RDRQESFADF LKQLAVDILR RLWRELMRAI F