Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1826 |
Symbol | |
ID | 6313195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1963417 |
End bp | 1965069 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642650549 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001924524 |
Protein GI | 188581079 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.365039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCG AATTCATCTA TCACATGCGG GGTCTGACCA AGACCTATGT CGGGGGCAAG AAGGTCCTCG ATAACGTCAA CCTGTCCTTC TACCCCGACG CCAAGATCGG CGTGCTCGGC ATCAACGGCG CCGGCAAGTC GACGCTGCTC AAGATCATGG CCGGCATCGA CAAGGACTGG ACCGGCGAGG GCTTCGTCGC GCAAGGCGCC CGCGTCGGCT ACCTGCCGCA GGAGCCGCAG CTCGATCCGA ACAAGTCGGT GCGCGAGAAC GTCATGGAGG GCGTGGCCGA GAAGCAGGCC CTGCTCGACC GCTACAACGA ACTCGCCATG AACTACTCCG AGGAGACGGC GGACGAGATG ACCGCCCTCC AGGACCAGAT CGAAGCGCAG AACCTCTGGG AGCTCGACTC GAAGGTCGAT CAGGCGATGG AAGCGCTGGG CTGCCCGAGC GACGAGCAGC CGGTCGCCAC CCTGTCGGGC GGCGAGCGCC GCCGCGTGGC GCTCTGCAAG CTGCTGCTGT GGGAGCCGGA ACTGCTGCTC CTCGACGAGC CGACCAACCA CCTCGACGCC GAGACCGTGA ACTGGCTCGA AGGGCACCTG CGGCAATATC CGGGCGCGAT CCTGATCGTG ACCCACGACC GCTACTTCCT CGACAACGTC ACGAGCTGGA TCCTCGAGCT CGATCGCGGC AAGGGCATCC CCTACGAGGG CAATTACTCC TCCTGGCTGG TGCAGAAGCA GAAGCGCCTG GAGCAGGAGG GCCGCGAGGA CATGGCCCGC CAGCGCGCCA TCGCCCGCGA GACGGAGTGG ATCTCGGCCT CGCCCAAGGC CCGCCAGAGC AAGTCCAAGG CGCGTATCAC GCGCTACGAG GAGCTGGTCG CCAAGCAGCA GCAGAAGGTC GATGCGACCG CGCAGATCGT CATCCCGATC ACCGAGCGGC TCGGCCAGAA CGTCATCGAG TTCAAGAACC TGAACAAGGC CTACGGCGAC CGGCTGCTGA TCGAGGATCT CTCGTTCAAG CTGCCGCCGG GCGGCATCGT CGGCGTGATC GGCCCGAACG GCGCCGGCAA GACCACCCTG TTCAAGATGA TCACCGGCAC CGAGAAGCCC GACGGCGGCG CGATCGAGAT CGGCGAGAGC GTGCATCTCG GCTATGTCGA TCAGTCCCGC GACGCGCTCG ATCCGAACGC GACGGTCTGG CAGGAAATCT CCGGCGGCAA CGACATCCTG TATTTCAACA AGCGCGAGAT CAATTCCCGC GCCTATTGCG CGGCCTTCGC CTTCAAGGGC GGCGACCAGC AGAAGAAGGT CGGCACGCTC TCGGGCGGTG AGCGCAACCG CGTCCACCTC GCCGCGACCC TGCGCAAGGG CGGCAACGTC CTGCTGCTGG ACGAGCCGAC CAACGACCTC GACATGGAGA CCCTGCGGGC GCTCGAAGAG GGCCTGGAGG ATTACGCGGG CTGCGCGGTG ATCATCAGCC ACGATCGCTG GTTCCTGAAC CGCATCGCGA CCCACATCCT CGCTTTCGAG GGCGACAGCC ATGTCGAGTG GTTCGAGGGC AACTTCTCCG ACTACGAGAC CGACAAGAAG CGTCGGCTCG GGACGGACTC GCTGATCCCG AAGAAGCTGA AGTACAAGAA GTTTTCGCGC TGA
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Protein sequence | MAREFIYHMR GLTKTYVGGK KVLDNVNLSF YPDAKIGVLG INGAGKSTLL KIMAGIDKDW TGEGFVAQGA RVGYLPQEPQ LDPNKSVREN VMEGVAEKQA LLDRYNELAM NYSEETADEM TALQDQIEAQ NLWELDSKVD QAMEALGCPS DEQPVATLSG GERRRVALCK LLLWEPELLL LDEPTNHLDA ETVNWLEGHL RQYPGAILIV THDRYFLDNV TSWILELDRG KGIPYEGNYS SWLVQKQKRL EQEGREDMAR QRAIARETEW ISASPKARQS KSKARITRYE ELVAKQQQKV DATAQIVIPI TERLGQNVIE FKNLNKAYGD RLLIEDLSFK LPPGGIVGVI GPNGAGKTTL FKMITGTEKP DGGAIEIGES VHLGYVDQSR DALDPNATVW QEISGGNDIL YFNKREINSR AYCAAFAFKG GDQQKKVGTL SGGERNRVHL AATLRKGGNV LLLDEPTNDL DMETLRALEE GLEDYAGCAV IISHDRWFLN RIATHILAFE GDSHVEWFEG NFSDYETDKK RRLGTDSLIP KKLKYKKFSR
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