Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1822 |
Symbol | |
ID | 6313191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1956924 |
End bp | 1957847 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642650545 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_001924520 |
Protein GI | 188581075 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.725987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCCG TGCCTCGTCT CGCGCTCGTC CTCCTGCCGG CCGCCCTCGC CGTGCTCGCC GATCCCTCTC GTGCGGCCCC CTCGCCCGAG AGCGAGACCG TGGAGCAGGC GCTGTGCCGG CTGATCGAGG ATGCGGCCAA GGCGCGGCAG CTGCCGGTGC CGTTCCTGAC CCGGCTGATC TGGCGCGAGA GTTCGTTCCG CGTCGGCGTC GTGAGCCCGG CCGGCGCCCA GGGCGTGGCG CAGTTCATGC CCGGCACCGC CAGGGAACGC GGCCTCACCG ATCCGTTCGA CCCCGAGCAG GCGATCCCGC ACGCGGCGCA TTTCCTGGCC GACCTGAAGC GGCAGTTCGG CAATCTGGGG CTCGCGGCGG CGGCCTATAA CGGCGGGCCG GGCCGCGTCT CGGCCTGGCT GGCCGGCAAC GGTGGCCTGC CGGCGGAAAC GCGGGCCTAC GTCATCGGCA TCACCGGCCG CCCGGCGGAG GATTGGCGCC CGAACGCCAG CGTCGAGATG CCGGAGGGTG CCGACCCGAA GGCGAAGAAA TCCGAGGCGA AGCCCGAGGA CAAGCCGCCT GCGCCGGAGG CCGAGACGCA GACCTGCCTC CAGGTCACCG CGGCGCTCCG CATCCCGTCG CGCGGGGACC GCTTCGCCCT CTCGGTCGAG GGCGGCCCGG CCGCGCCCTG GGGCGTGCAG CTTGCCGGAA ACTTTTCCAA GTCGCTGGCG CTGGCGAGCT TCCAGCGGGC GCGCACGCGC TACACCAGCG TGATCGGCGA GGTGCGGCCG ATGATCATCG GCACCCGCCT GCGCTTCCGC GGCACCCGCA CCTTCTACCG GGTGCGCATT CCGGCCGAGA GCCGGGGCGC CGCCGATGGG CTCTGCCAGA AGATCCGCGG CGTCGGCGGC GCCTGCATCG TCCTGAGGAC ATAA
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Protein sequence | MRPVPRLALV LLPAALAVLA DPSRAAPSPE SETVEQALCR LIEDAAKARQ LPVPFLTRLI WRESSFRVGV VSPAGAQGVA QFMPGTARER GLTDPFDPEQ AIPHAAHFLA DLKRQFGNLG LAAAAYNGGP GRVSAWLAGN GGLPAETRAY VIGITGRPAE DWRPNASVEM PEGADPKAKK SEAKPEDKPP APEAETQTCL QVTAALRIPS RGDRFALSVE GGPAAPWGVQ LAGNFSKSLA LASFQRARTR YTSVIGEVRP MIIGTRLRFR GTRTFYRVRI PAESRGAADG LCQKIRGVGG ACIVLRT
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