| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1819 |
|---|
| Symbol | |
|---|
| ID | 6313188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1954569 |
|---|
| End bp | 1955243 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650542 |
|---|
| Product | transglutaminase family protein cysteine peptidase BTLCP |
|---|
| Protein accession | YP_001924517 |
|---|
| Protein GI | 188581072 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3672] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG CGTTCTCCAA GCTCTGTGAC GTCCGGCCCA CCCGCTCCTT CACGACCCGC
CTGCTGGCGG GCCTCGCCCT GGCCGGGGCC TTCCTCGCCG CGCCCGCGCC GAAGGCGGAG
GCGCAGACCA CCGCCGCGCT GCCGGCGATG AGCCTGTCGG CGGCCACCAC CGGCCCGGCC
CGGCCGATCG CCGCCTGGGC CGAGTTCTGC GAGCGCTATC CGGGCGAATG CGCGGTCGAT
CGCACCGAGC CCGCCAGCGT CACCCTGACG CCGGCTTTGT GGCAGACGAT CAACGGCGTG
AACCGCCGGA TCAACCGGGC GGTGGAGGCG GTGACGGATC AGGAGCACTG GCGCGCCGCC
GATCGCTGGG ACCTCGCCGA GGACGGCCGG GGCGATTGCG AGGACTTCCA GCTCCTCAAG
CGCCGCCTTC TGGTCGAGGC CGGTCTGCCG CGCCGGGCGA TGCGGATGAC CGTGGTGATC
GACGAGAAGG GCGAGGGCCA TGCCGTCCTC ACCATCCTCA CCAGCCGCGG CGACCTGATC
CTCGACAACA AGACCAACGC GGTGCTGCCC TGGACCCAGA CCGGCTACAC CTTCGTCAAG
CGCGAGAGCC AGGACGCGGT GGGTTGGGTC GCGCTCGGCC GCGACGCCTC GCCGCTCACC
GCAGCCAACC GCTGA
|
|---|
| Protein sequence | MRIAFSKLCD VRPTRSFTTR LLAGLALAGA FLAAPAPKAE AQTTAALPAM SLSAATTGPA
RPIAAWAEFC ERYPGECAVD RTEPASVTLT PALWQTINGV NRRINRAVEA VTDQEHWRAA
DRWDLAEDGR GDCEDFQLLK RRLLVEAGLP RRAMRMTVVI DEKGEGHAVL TILTSRGDLI
LDNKTNAVLP WTQTGYTFVK RESQDAVGWV ALGRDASPLT AANR
|
|---|
| |