Gene Mpop_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1817 
Symbol 
ID6313962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1952682 
End bp1954046 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content72% 
IMG OID642650540 
Producthistidine kinase 
Protein accessionYP_001924515 
Protein GI188581070 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC CGACCCTCTG GATGGAGCCG GCCGCCGAAC CGCAGACCGT CGAGTCCCTG 
AATCGGCGGG TGGCCAAGCT GGAGCGCATC AACGCGGCCT TGATGGCCCA TGTCGAGCGC
ACCATGGACC AGCAGGGCGG CGCCTACTCG CTGTTCCAGA CCGCGATCAT GCTGGAGGGC
CGCGTCCGCG CCCGCACGGA AGAGCTCACC GCGCTGATGC ACAGCCTGGA GCGCTCGAAC
GAGGCGATGC AGGCGGCGAA AGAAGAGGCC GAGACCGCCA ACCGCTCGAA GACGCGCTTC
CTGGCGGCGG CCAGCCACGA CCTGCTCCAG CCCCTCAACG CCGCCCGCCT CTCGCTCTCG
GCCCTGACCG ACCTCGCCCC GGGCCCGGAG TCGAAGGCGG TCGCCCGGCA GGTGGAGCGC
GGCCTGGAGA CGATCGAGGA TCTGATCAAG GCGCTGATCG ACATCTCGAA GCTCGATGCC
GGCATCGTGC GCCCGGTGGT CAAGCCCGTG CGGCTCGCCG ACCTCGTGGC CGGGATCGAG
GCGAGCTTCC GGCCGTTCGC CGAACGCAAG GAACTGCGCC TCGTCACCCG CTGCGCCGAC
CTCGTGGTGG AGACCGACGG CGTCCTGCTC CAGCGCATCC TGCAGAACCT CGTCTCCAAC
GCGATCCGCT ACACCGAGCG CGGCGGCGTG CTGATCGCGG CGCGGCGCCG GGACAAGCTC
TGCCGGATCG ACGTGGTCGA TACCGGCTGC GGCATTCCCG AGAACGAGCG GGCGCTGGTC
TTCGAGGAGT TTTTCCGCGG GGGGCGCGAG GGGGACGACG GCGGCGTCGG CCTCGGGCTC
GGCCTGTCGA TCGTGCAGCG CACCGCCTCG ACGCTGGGCC ACGCCATCGC GCTGCATTCC
CGCACCGGCC ACGGCACGCG GCTGAGCCTC ACCCTGCCGC TCGCGGCGCA GCGCCCGGAT
GCGCGGGTGA CGCTGGCGCC GCTCGCGACC GCGCTGACCG GCGCGCGGGT GCTGGCGATC
GAGAACGATG CCTCGACGGC CGAGGCGCTG CAGCGCCTCC TGCGCAGTTG GGATGCCGAG
GTGCAGGTGT TCCGCGATCT TGCCGGCGTC GTCGCCGCGC TCGGGGCCGG GTTGGCGCGG
CCGGACGTGA TGGTGATCGA CTACCACCTC GACAACGGCG CCTGCGGCCT CGACGTGGTG
GACTATCTGC GACGCGACCG GGGTTGGGTG ACGCCGGTGA TCCTCACCAC CGCCGACCAC
GGCGCCGACA TCGCCGCCCG CGCCCAGGCC ACCGGGGCCG AACTCGTCCA CAAGCCGATC
AAGCCGGCGC AGCTGCGCTC GCTGCTGGCC TACATGCTGG CGTGA
 
Protein sequence
MNRPTLWMEP AAEPQTVESL NRRVAKLERI NAALMAHVER TMDQQGGAYS LFQTAIMLEG 
RVRARTEELT ALMHSLERSN EAMQAAKEEA ETANRSKTRF LAAASHDLLQ PLNAARLSLS
ALTDLAPGPE SKAVARQVER GLETIEDLIK ALIDISKLDA GIVRPVVKPV RLADLVAGIE
ASFRPFAERK ELRLVTRCAD LVVETDGVLL QRILQNLVSN AIRYTERGGV LIAARRRDKL
CRIDVVDTGC GIPENERALV FEEFFRGGRE GDDGGVGLGL GLSIVQRTAS TLGHAIALHS
RTGHGTRLSL TLPLAAQRPD ARVTLAPLAT ALTGARVLAI ENDASTAEAL QRLLRSWDAE
VQVFRDLAGV VAALGAGLAR PDVMVIDYHL DNGACGLDVV DYLRRDRGWV TPVILTTADH
GADIAARAQA TGAELVHKPI KPAQLRSLLA YMLA