Gene Mpop_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1801 
Symbol 
ID6313133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1932617 
End bp1933366 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID642650524 
ProductABC transporter related 
Protein accessionYP_001924499 
Protein GI188581054 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.703769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.43923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CTCTCGACGT CGCCGGCGTC AGCCACCGTT TCGGCCAGCG CGCGGCGCTC 
TCCGACGTGT CGCTGACGGT GGAGCGCGGG CACTTCATGG CCTTGCTCGG ACCCAACGGT
GCGGGCAAGA CCACGCTGTT CTCGGTGATC ACCCGGCTCT ACAACAACCA GGAGGGCCGG
GTCTCGATCC TCGGCCATCC CCTCGACCGT GAGCCGTCGA GGGCGCTGGC CGGCCTCGGC
GTGGTGTTCC AGGCGCGCAC CCTCGATACC GATCTCACCG TCGCGCAGAA CCTGCACTAC
CACGCCAGCC TGCACGGCAT CGGCCGGGCG GCGGCGCGGG CCCGCATCGA GGCTCTGCTC
GCCCGCGTCG GCCTCGCCGA GCGGCGCGAC GACAAGATCC GGACGCTCTC CGGCGGCCAG
TCGCGGCGCA TCGAGATCGC CCGCTCGCTG ATCCACGCGC CGCGCCTGCT GCTGCTCGAC
GAGCCGACCG TCGGCCTCGA TCTCGAATCG CGCGCCGACA TCGTCGCCAT CGTCCGCGCC
CTGGTGCGGG AGGAGGGCCT GTCGGTGCTG TGGGCGACCC ACATCTTCGA GGAGATTTCT
CCCGAGGACG ACGCCGTGGT GCTCCACAAG GGCCGCATCG TCGCCCGCGG CCGTGCCGGC
GAGATCGGTG GGCCCGGCGA GAGCCTGGAA GACGCCTTCC GCCGCCTCGT CGCCGCGCCC
GACAAGCGCA CCGTGAGGTC CGCCGCATGA
 
Protein sequence
MSAALDVAGV SHRFGQRAAL SDVSLTVERG HFMALLGPNG AGKTTLFSVI TRLYNNQEGR 
VSILGHPLDR EPSRALAGLG VVFQARTLDT DLTVAQNLHY HASLHGIGRA AARARIEALL
ARVGLAERRD DKIRTLSGGQ SRRIEIARSL IHAPRLLLLD EPTVGLDLES RADIVAIVRA
LVREEGLSVL WATHIFEEIS PEDDAVVLHK GRIVARGRAG EIGGPGESLE DAFRRLVAAP
DKRTVRSAA