| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1752 |
|---|
| Symbol | |
|---|
| ID | 6309152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1885320 |
|---|
| End bp | 1886210 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642650475 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_001924450 |
|---|
| Protein GI | 188581005 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.711278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.62152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC TCATCGACGA GAAGACCCCG ATCCTCGTCC AGGGCATCAC GGGCGACAAG
GGCACCTTCC ACGCCAAGGA AATGATCGCC TACGGCTCGA ACGTCGTCGG TGGCGTCACC
CCGGGCAAGG GCGGCAAGAC CCATTGCGGC GTGCCGGTGT TCAACACCGT CAAGGAGGCC
GTCGAGGCCA CCGGCGCCAC CACCTCGATC ACCTTCGTGG CGCCCCCCTT CGCGGCGGAC
GCGATCATGG AGGCGGCCGA TGCCGGTCTC AGGCTCGTCT GCTCGATCAC CGACGGCATC
CCCGCCCAGG ACATGATGCG GGTGAAACGC TACCTGCGGC GCTACCCGAA AGAGAAGCGC
ACGATGGTGG TGGGCCCGAA CTGCGCGGGC ATCATCTCGC CCGGCAAGTC GATGCTCGGC
ATCATGCCCG GCCACATCTA CCTGCCGGGC AAGGTCGGCG TGATCTCCCG CTCCGGCACG
CTGGGTTACG AGGCCGCCGC CCAGATGAAG GAACTCGGCA TCGGCATCTC GACCTCCGTC
GGCATCGGCG GCGACCCGAT CAACGGCTCG TCCTTCCTCG ACCACCTCGC CCTGTTCGAG
CAGGATCCGG AGACCGAGGC CGTGCTGATG ATCGGCGAGA TCGGCGGTCC GCAGGAGGCC
GAGGCCTCCG CCTGGATCAA GGAGAACTTC TCGAAGCCGG TGATCGGGTT CGTGGCCGGC
CTCACGGCGC CGAAGGGCCG CCGCATGGGA CATGCCGGCG CGATCATCTC GGCGACCGGC
GACAGCGCCG CGGAGAAGGC CGAGATCATG CGCTCCTACG GCCTGACCGT GGCGCCCGAT
CCGGGCTCCT TCGGCCAGAC CGTCGCCGAC GTGCTCGCCC GGGCGGCGTA A
|
|---|
| Protein sequence | MSILIDEKTP ILVQGITGDK GTFHAKEMIA YGSNVVGGVT PGKGGKTHCG VPVFNTVKEA
VEATGATTSI TFVAPPFAAD AIMEAADAGL RLVCSITDGI PAQDMMRVKR YLRRYPKEKR
TMVVGPNCAG IISPGKSMLG IMPGHIYLPG KVGVISRSGT LGYEAAAQMK ELGIGISTSV
GIGGDPINGS SFLDHLALFE QDPETEAVLM IGEIGGPQEA EASAWIKENF SKPVIGFVAG
LTAPKGRRMG HAGAIISATG DSAAEKAEIM RSYGLTVAPD PGSFGQTVAD VLARAA
|
|---|
| |