| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1683 |
|---|
| Symbol | |
|---|
| ID | 6309397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1817509 |
|---|
| End bp | 1818762 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642650406 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001924381 |
|---|
| Protein GI | 188580936 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.231948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCCA CCACCCATCT CGCCCTGATC AACGTCTTCA TCGGCGACAT CCAGGGCGGG
CTTGGGCCGT TCCTCGGCAC GTGGCTCGCG CAGATGCGGC AGTGGAGCCC TTCGCAGGTC
GGGCTCGTCA CCACGCTGGT CGGGGCCGGC ACGCTGCTGC TGAGCGGCCC CTTCGGTGCC
CTGGTCGACC GGCTCGGACG CCCGCGCCTG CTCATCGTGG TCTCCTGCGC CGCGATCCTC
GCCGGCACGC TGCTGCTGAT GCCGGCCCAT TCCTTCGTGC CGGTGCTGGC GGCGCAGTTC
CTGGCCGCGG CCGGCGGCAC GCTGCTGCTG CTCGCGGTCA CGGCGCTGAC GCTCGGCGTC
GTCGGCAAGG AGGCGTTCCC GCGCCAGCAG GGGCGCAACC AGGCCTTCAA CCATGTCGGC
ATCCTGATCG CGGCCGGGCT CATCACCCTC GGCACCGCCC ATTTCGGGCC CGAGATCGCC
TTCTGGGTGC TGGGGGCGAT GGCCGCCGCC GCCATCGCCG CAGCCCTGGC GATGCCGGCC
AGCGCCTTCA GCCGGCGCCG GGCGGCGGGC TGGAAGGAGG AGGACGAGGC GGAGCCGGCC
CGCTCCTCCT ACGTCCAGGT CTTCACCAAC CGGCGGCTCC TCGTGCTCGC CGTGGCGCTC
GCCCTGTTCC AGCTCGGCAA CGGCGGCATG CTGAGCCTGC TGGGGCAGAA GCTCGTCCAC
ACCGCCGACA ACCCCACCGC CTGGACCGCC CGCTACGTCA TGGTGGCCCA GCTCGTGATG
GTGCCGGTGG CGCTCGCCGC CGGCTCGCTC GCCGATCGGC GCGGCCGGCG CCAGCTCCTC
ATCGCCGCCT GCCTCGTTCT ACCGATCCGG GCGGCGCTCT CGGCCTTCAT CGACGACCCG
TACTGGCTCA TCACGGCGGA AATCCTCGAC GGCGTGGCCT CGGGCATCAT CGGCGTGGCG
GTGCCGGTGG TGGTGGCCGA CCTCACCTGG GGCTCGGGCC GCACCCAGAC GGCGCTTGGC
ACCGTCAACG CCGTGCAGGG CGCGGGCGGC GCGCTCTCGG CCTGGTACGG CGGCCTCGCC
CAGGGCTGGT TCGGCTGGAG CGGCTCGTTC CTGGCGCTGG GCGCGGCGGG CGTCGGGGCG
CTCGCCCTGG TCTGGTGGCT CGCCGCCACC ACGGAGGAGA GCCGCTCGCA GCGGCGCCGC
ACCCGGCGCG AGGAGCGCCG CCGCGCCGCG CGCTCCGCCG AGACGCCGGC CTGA
|
|---|
| Protein sequence | MAPTTHLALI NVFIGDIQGG LGPFLGTWLA QMRQWSPSQV GLVTTLVGAG TLLLSGPFGA
LVDRLGRPRL LIVVSCAAIL AGTLLLMPAH SFVPVLAAQF LAAAGGTLLL LAVTALTLGV
VGKEAFPRQQ GRNQAFNHVG ILIAAGLITL GTAHFGPEIA FWVLGAMAAA AIAAALAMPA
SAFSRRRAAG WKEEDEAEPA RSSYVQVFTN RRLLVLAVAL ALFQLGNGGM LSLLGQKLVH
TADNPTAWTA RYVMVAQLVM VPVALAAGSL ADRRGRRQLL IAACLVLPIR AALSAFIDDP
YWLITAEILD GVASGIIGVA VPVVVADLTW GSGRTQTALG TVNAVQGAGG ALSAWYGGLA
QGWFGWSGSF LALGAAGVGA LALVWWLAAT TEESRSQRRR TRREERRRAA RSAETPA
|
|---|
| |