Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1678 |
Symbol | rho |
ID | 6309713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1811809 |
End bp | 1813152 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642650401 |
Product | transcription termination factor Rho |
Protein accession | YP_001924376 |
Protein GI | 188580931 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0702428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAC AGAACGACGC TCTCGCCCCC GTCGAAGCTC CGGCCGAAGC CGCCGTCGCG CCGGCCGACC TCGCCGCCCG GCGAGAGGTG AAGCTCCAGG ACCTCAAGTC CAAATCGCCG ACCGAACTCA TCGCCTTCGC CGAGGAGGTC GAGGTCGAGA ACGCATCGAC CATGCGCAAG CAGGAGTTGA TGTTCGCGAT CCTCAAGCAG CTCGCGGCCA ACGAGACCGA GATCATCGGT GCCGGCACGG TCGAGGTGCT TCAGGACGGG TTCGGCTTCC TGCGCTCGAA CGACTCGAAC TACCTCCCGG GTCCGGACGA CATCTACATT TCGCCGACCC AGATCCGCCG CTTCGGCCTG CGCACCGGCG ATACGGTGGA GGGCCCGATC CGCGGCCCCA AGGATGGCGA GCGCTACTTC GCGCTGATCA AGGTCAACAC GATCAACTTC GAGAACCCGG AGAAGATCAA GCACAAGGTC CACTTCGACA ACCTGACGCC GCTGTTCCCG ACGAAGCGGT TCAAGCTCGA ACTGGACAAC CCGACCAAGA AAGATTTCAG CCCCCGCATC ATCGACATCG TCTCGCCGAT CGGCAAGGGC CAGCGCGCGC TGATCGTCGC GCCGCCGCGT ACCGGCAAGA CCGTGCTGAT GCAGAACATC GCGCAGTCGA TCACCCTCAA CCACCCCGAA TGCTACCTCA TCGTGCTGCT CATCGACGAG CGCCCGGAGG AGGTGACCGA CATGATCCGC TCGGTGAAGG GCGAGGTCAT CGCCTCGACC TTCGACGAGC CGGCCACCCG CCACGTGCAG GTCGCCGAGA TGGTGATCGA GAAGGCCAAG CGGCTCGTGG AGCACGGCCG CGACGTGGTG ATCCTGCTCG ACTCGATCAC CCGGCTGGGC CGCGCCTACA ACACCGTGGT GCCGTCCTCC GGCAAGGTGC TGACCGGCGG CGTCGACGCC AACGCCCTGC AGCGGCCCAA GCGCTTCTTC GGCGCGGCCC GCAACATCGA GGAAGGCGGC TCGCTCACCA TCATCGCCAC CGCGCTGATC GATACCGGAT CGCGCATGGA CGAGGTGATC TTCGAGGAGT TCAAGGGCAC CGGCAACTCC GAGATCATTC TCGACCGCAA GGTCTCCGAC AAGCGCATCT TCCCGGCCAT CGACATCACC CGCTCCGGTA CCCGCAAGGA GGAGCTGCTG GTGCCGCCGG ATTCGCTCAA GAAGACCTAT GTGCTCCGCC GCATCCTCAA CCCGATGGGC GTCACCGACG CGATCGAGTT CCTCATGGAC AAGCTGCGCC AGACCAAGAG CAACAGCGAC TTCTTCGACT CGATGAACAC CTGA
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Protein sequence | MTSQNDALAP VEAPAEAAVA PADLAARREV KLQDLKSKSP TELIAFAEEV EVENASTMRK QELMFAILKQ LAANETEIIG AGTVEVLQDG FGFLRSNDSN YLPGPDDIYI SPTQIRRFGL RTGDTVEGPI RGPKDGERYF ALIKVNTINF ENPEKIKHKV HFDNLTPLFP TKRFKLELDN PTKKDFSPRI IDIVSPIGKG QRALIVAPPR TGKTVLMQNI AQSITLNHPE CYLIVLLIDE RPEEVTDMIR SVKGEVIAST FDEPATRHVQ VAEMVIEKAK RLVEHGRDVV ILLDSITRLG RAYNTVVPSS GKVLTGGVDA NALQRPKRFF GAARNIEEGG SLTIIATALI DTGSRMDEVI FEEFKGTGNS EIILDRKVSD KRIFPAIDIT RSGTRKEELL VPPDSLKKTY VLRRILNPMG VTDAIEFLMD KLRQTKSNSD FFDSMNT
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