| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1660 |
|---|
| Symbol | |
|---|
| ID | 6313335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1792914 |
|---|
| End bp | 1793990 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642650384 |
|---|
| Product | Protein of unknown function DUF1963 |
|---|
| Protein accession | YP_001924359 |
|---|
| Protein GI | 188580914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.276977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATA CGCCCGCCGA CGCCCAGGCC CAGCTCGCCC CGTACTTCTC GCGTCCGCAG
GTGGAGATGA TCGTCGGGGT GCTCGAGCCG ACCCTCGTGT TCCGCCCATT GCCGAGAGAC
AAGGCGGGTG ACGAACAAGG CCTCGGCGGC TCGCGGATCG GCGGGACACC GGACCTTCCG
CCCGGCCTCG CATGGCCGCG CCGGGCCAAT CCGGTCGATG GGGAGGCCAT TGCCGGGCGC
GGCAACGCGG AGGCCGGGGA GGCAATGCGA CGGCATTTCC GCAAGGAATT GCCCTACGCC
TTCTTCGCAC AGGTCGACCT CGGCGAAGCG GCGCGCCAAG CGAGGGGACA GAACACGCCC
GCCGCCGCCC TGCCGGGACA GGGGCGGCTC CTGTTCTTCT ACGATCTCAC CGCCGGCCCC
TGGGACAACG GCACCGGATC CGCCCGGGTG ATCTGGGACG AGAGCCCGCG CGAGAGCCTC
GTGGTCCAGG CCATGCCGCC CGATCTTGCA AGGGCGGCCG AGGCACACCG GGCGGAGATC
GCGACGGTGA ACCGGGCGTT CAAGCTGCCG CTCCCGAAGC CTGATTCCGG CACGCCCTAT
GGCGGCCCGG CCCGGCCGAT GCACCTCCAC GCCACCCTGC GCCCGCCGGC CGTCGAGAGC
CTGGAGATGG AGGCACGGCC GGCCCTGAAG GCGGCGCTGG CCCGCGATGA CGACGAGGCG
GGCTTTCGAG ACGCGTATCA GGATCTCTTC GCGAAAGCAT TCGACAGCTA TTACGGCGCC
GCCAATGCGG GCCGGCGCAA CCAGCTCCTC GGCTCGCCGC TGCCGGAGCA GAGCGACCCG
CGCTTCGAGG CGGAGGTCGT CACCCGCTTC GGGGTGCAGC ATCTCGACCG GAACCGGATC
GCGGCGCACC GGGCCGAGAT CGAGGCCGGC CAACGGACCT GGCGCCTGCT CCTGCAGATC
GATGTCGGCG ACTTCCTGCA GGCGGACGGG GAGGGCACCG TCTACTTCCT GATCCGCGAC
ACCGACCTCT CGGAACGCCG CTTCGACCGG GTGGTGGCCG TCTACCAGCA GACCTGA
|
|---|
| Protein sequence | MFDTPADAQA QLAPYFSRPQ VEMIVGVLEP TLVFRPLPRD KAGDEQGLGG SRIGGTPDLP
PGLAWPRRAN PVDGEAIAGR GNAEAGEAMR RHFRKELPYA FFAQVDLGEA ARQARGQNTP
AAALPGQGRL LFFYDLTAGP WDNGTGSARV IWDESPRESL VVQAMPPDLA RAAEAHRAEI
ATVNRAFKLP LPKPDSGTPY GGPARPMHLH ATLRPPAVES LEMEARPALK AALARDDDEA
GFRDAYQDLF AKAFDSYYGA ANAGRRNQLL GSPLPEQSDP RFEAEVVTRF GVQHLDRNRI
AAHRAEIEAG QRTWRLLLQI DVGDFLQADG EGTVYFLIRD TDLSERRFDR VVAVYQQT
|
|---|
| |