Gene Mpop_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1616 
Symbol 
ID6312416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1745066 
End bp1745497 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID642650340 
Productheat shock protein Hsp20 
Protein accessionYP_001924315 
Protein GI188580870 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0212201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00491481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGGC CGTCCCCGTT CGGATATCCG TTCCTGCTCG GCTTCGACGA AATCGAGCAG 
GCGCTCGACC GCGTCTCGAA GGCCGCCAGC GACGGCTACC CGCCCTACAA CATCGAACGT
GTCACCCGCA GCGAGCGCGA GCCGGAACGC TTGCGTATCA CGCTGGCGGT CGCCGGCTTT
ACGCAGGATC AGCTCGACGT CTCCCTGGAG GAGAATCAAC TGGTCGTGCG CGGCCGGCAG
GTCGACGACA AGTCCCGCCA GTTCCTGCAC CGCGGCATCG CCGCGCGGCA GTTCCAGCGG
GCCTTCCTTC TTGCCGACGG CATGGAGGTG CTGGGGGCGG AACTGTCGAA CGGCCTGCTC
GCGATCGATC TCGCGCGCCC GGAGCCGGAG CGCATCGTGC GCAAGATCGC CATCGCCGCC
AAGGATCCGT GA
 
Protein sequence
MTRPSPFGYP FLLGFDEIEQ ALDRVSKAAS DGYPPYNIER VTRSEREPER LRITLAVAGF 
TQDQLDVSLE ENQLVVRGRQ VDDKSRQFLH RGIAARQFQR AFLLADGMEV LGAELSNGLL
AIDLARPEPE RIVRKIAIAA KDP