Gene Mpop_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1612 
SymbolinfC 
ID6312439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1741718 
End bp1742239 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID642650336 
Producttranslation initiation factor IF-3 
Protein accessionYP_001924311 
Protein GI188580866 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00252676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGCCC CGCAGAAGGA CGGGCCGCGC GCAAACCGGG ACATCCGCGG TGTCCGCGAC 
GTCCAGCTCA TCGACCAGGA CGGACAGAAC CGGGGTGTCG TGCCCTTCTT CGACGCGCTG
GCCATGGCTG AGGAGGTCGG GCTCGATCTC GTCGAAATCG CGCCGAACTC GGTCCCTCCC
GTCTGCAAGT TCCTCGATTA CGGGCGCTTC CGCTTCAACG AACAGAAGAA GCAGAACGAG
GCCCGCAAGC GGCAGAAGAC GGTCGAGGTG AAGGAGATCA AGCTCCGCCC CGGCATCGAC
AAGCACGACT ACGACGTGAA GATGAAGGCC GTACAACGGT TCTTCGAGGA AGGCGACAAG
GTCAAGGTCA CCCTCCGCTT CCGTGGTCGC GAGATCGCCC ACCAGGATAT CGGTCTGCGC
CTTCTGGAAC GGGTGAAGCA GGAGACCCAG GAGGTCGCCA AGGTCGAGAG CGAACCGATG
CTCGAAGGCC GCCAGATGAT CATGATCCTG GCGCCGCGCT AG
 
Protein sequence
MPAPQKDGPR ANRDIRGVRD VQLIDQDGQN RGVVPFFDAL AMAEEVGLDL VEIAPNSVPP 
VCKFLDYGRF RFNEQKKQNE ARKRQKTVEV KEIKLRPGID KHDYDVKMKA VQRFFEEGDK
VKVTLRFRGR EIAHQDIGLR LLERVKQETQ EVAKVESEPM LEGRQMIMIL APR