Gene Mpop_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1588 
Symbol 
ID6312599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1715768 
End bp1716499 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID642650312 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001924287 
Protein GI188580842 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.556176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCGT ACGGATCTCT CTCCCTTCCC GTCACCCTGA CCGACAGCGA GAGGGAGGCG 
AGCGACCCGG TTTCCGATCC GCGCGCCGGC CCCGCTCGTC CGCAGCGCCT CAGCGGCCCG
GCCGCCCGTG CCAGACCCAC GCCGGTCTCG ACGGATGCGC GATTGCTGGC CATCGCCACG
GAGCACCTGA CCCGGCTCGG CCCCAAACGC GTCACGGTCG TGGCGGTCGC GGCGGAGGCG
GGCATGACCC ATGCCAACGT CTACCGCTAC TTCCCCTCCA AGGACGCCCT GCTCGACGCC
GTCGCCGGAC GCTGGCTGCG CGACCTCGAG ACGGAACTCG CGGGCATCGC CGACGCGCCC
GACCCCGCCG ACGACAAGAT CGAGCGCTTC ATCAGCGCGC TCGCCAGCGC GCAGAGCGAG
ATGCTGACCC GCGAGCCCAA CCTGTTCGCC GTGCATCTCG ACGCCACCGT CGCCTCCCGC
CCGATCGCCC GCCGTCACCG CGTGCGGCTG CGTGCCCTCG TGGAGCGCGT GGTGGAGGAA
GGGATCGGCA CCGGCGTCTT CGCCGCCCGC GACCGCGAGC GGGCGATCGC CGTCATCTTC
GACGCCAGCT ACCGCTTCAC CCATCCGGTC GCGATCCAGC ATGACGCGGA CGTCCCCCGC
GACCTGCTCG ACGCCCGCCT CGGCGCGGTG ATCCAGTCGA TTCAGCGGGC GCTGCGCACC
GGCACTTTCT GA
 
Protein sequence
MLPYGSLSLP VTLTDSEREA SDPVSDPRAG PARPQRLSGP AARARPTPVS TDARLLAIAT 
EHLTRLGPKR VTVVAVAAEA GMTHANVYRY FPSKDALLDA VAGRWLRDLE TELAGIADAP
DPADDKIERF ISALASAQSE MLTREPNLFA VHLDATVASR PIARRHRVRL RALVERVVEE
GIGTGVFAAR DRERAIAVIF DASYRFTHPV AIQHDADVPR DLLDARLGAV IQSIQRALRT
GTF