Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1588 |
Symbol | |
ID | 6312599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1715768 |
End bp | 1716499 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642650312 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001924287 |
Protein GI | 188580842 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.556176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGT ACGGATCTCT CTCCCTTCCC GTCACCCTGA CCGACAGCGA GAGGGAGGCG AGCGACCCGG TTTCCGATCC GCGCGCCGGC CCCGCTCGTC CGCAGCGCCT CAGCGGCCCG GCCGCCCGTG CCAGACCCAC GCCGGTCTCG ACGGATGCGC GATTGCTGGC CATCGCCACG GAGCACCTGA CCCGGCTCGG CCCCAAACGC GTCACGGTCG TGGCGGTCGC GGCGGAGGCG GGCATGACCC ATGCCAACGT CTACCGCTAC TTCCCCTCCA AGGACGCCCT GCTCGACGCC GTCGCCGGAC GCTGGCTGCG CGACCTCGAG ACGGAACTCG CGGGCATCGC CGACGCGCCC GACCCCGCCG ACGACAAGAT CGAGCGCTTC ATCAGCGCGC TCGCCAGCGC GCAGAGCGAG ATGCTGACCC GCGAGCCCAA CCTGTTCGCC GTGCATCTCG ACGCCACCGT CGCCTCCCGC CCGATCGCCC GCCGTCACCG CGTGCGGCTG CGTGCCCTCG TGGAGCGCGT GGTGGAGGAA GGGATCGGCA CCGGCGTCTT CGCCGCCCGC GACCGCGAGC GGGCGATCGC CGTCATCTTC GACGCCAGCT ACCGCTTCAC CCATCCGGTC GCGATCCAGC ATGACGCGGA CGTCCCCCGC GACCTGCTCG ACGCCCGCCT CGGCGCGGTG ATCCAGTCGA TTCAGCGGGC GCTGCGCACC GGCACTTTCT GA
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Protein sequence | MLPYGSLSLP VTLTDSEREA SDPVSDPRAG PARPQRLSGP AARARPTPVS TDARLLAIAT EHLTRLGPKR VTVVAVAAEA GMTHANVYRY FPSKDALLDA VAGRWLRDLE TELAGIADAP DPADDKIERF ISALASAQSE MLTREPNLFA VHLDATVASR PIARRHRVRL RALVERVVEE GIGTGVFAAR DRERAIAVIF DASYRFTHPV AIQHDADVPR DLLDARLGAV IQSIQRALRT GTF
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