| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1566 |
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| Symbol | |
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| ID | 6313568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1688130 |
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| End bp | 1689581 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642650290 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001924266 |
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| Protein GI | 188580821 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAACA ACAAGCGCGA GGCGCTCCGC CAAAAAGCCT TGGCTGAAAT CGCCCTCCTC
GACACGCCGC CCGAGCGCGA GTTCGATGTG TTGGCAAAGC TCGCACAACG GATGCTTGGC
ACCGGCATGT CCTCAATCAC CCTGGTCGCC CCGGAGCGAC AGTGGTTCAA GGCACGTTGC
GGGCCTCTGG CACCTCAGAC CCCGCGGGCT CAGGCATTCT GCCCTGTCGT GGTCGAGACC
GAGGCTCCAC TCACCGTGGC GGACGCTCGC CTCGACCCTC GCTTCGCCGA AAGCCCGTTT
GTCACGGGCG CACCGAACAT CCGCTACTAT GCGGGCGTGC CGGTTCGCAT CCAGCAGCCC
GAGGGGGACT GGGTGACGAT CGGCACGCTC TGTGTCCTCG ACGAGCAGCC GCGCGAGCCA
AGGCCGACCG ACTTGGAGGT CTTGGAAGAG TTGGCCTGCG TCGCCGAGGC TCTGATCGAA
GCTCGGGCCG TCGCTCTTCG CGCTGCCGGA GCGGCTGAGG AGCGTCGTCT GGCCGTCGAG
CGGCTGGAGC GTGAACGCCG CCAGTTCAAG CAGGCCGAGC GCATGGCCGA CATGGGATCG
TACCGGTACG ACATCGAGAA ACAGTCGACC GCTTGGTCGG ACGGCGTCTT CGCCATCCAC
GAACGGCCGG TGAGCAGCGG CGTGCCGAAC AGCGAAGTCT TGAACTACTT CCCTGAGCCC
GACCGTACCG CGTTCGTCGC CGCGGTGATG CGCACCCTGA ACACAGGCGA GCCCTTTGAG
ATGGACGCCG ACTTCGTGAC CGCCAAAGGC AACCCGCGGC GCGTACGATG CTCCTGCGAG
ATCGAGTTGG CTAAGGGCAA GCCCGTTGCC CTCATCGGTC TGATCCAGGA CATCACGGAA
CGACACGACT TGGAGCAGCG ACTGCGCCAC CAAGCCTGCA CTGACGACCT GACCCAATTG
GCCAACCGAG CCGAGTTTCA CCGTGTGCTC GATGCACGGT TGCGGGAGGC GCGCCTCGCG
GACGGCGACG TGGCGGTGCT TTTGATCGAC CTCGATGGCT TCAAGGGCGT CAACGACGTC
CTCGGCCATG CCGCGGGTGA CGCGGTGTTG CGCCGTGTCG CCGATCGCTT GCGCGCCTCG
TGCAACGACG GGGGTGTTCC GGCGCGTCTG GGGGGCGACG AGTTTGCAAT TGTGATGTCT
GCCGATCTTG ATTGCGTGGG ACTCGATCGG AAGGTGCGGC GCCTCTTGCA CGACCTTGAG
ATCGTTGTGG ACGGACAGGG GCTCATCGCC CGCGTAACGG GAACGATCGG CATCGCGTGG
TCGAGCGCAG CCGCGCAGGA CCGCGACGTT CTCCTTCGTC AAGCCGATGC TGCGCTTTAC
GCCGCCAAGC GCACACGGAA GGGAACGGCG CAAACCTTCC AAGCCGGTAC GGACGATCGG
CAGGTTGGTT GA
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| Protein sequence | MSNNKREALR QKALAEIALL DTPPEREFDV LAKLAQRMLG TGMSSITLVA PERQWFKARC
GPLAPQTPRA QAFCPVVVET EAPLTVADAR LDPRFAESPF VTGAPNIRYY AGVPVRIQQP
EGDWVTIGTL CVLDEQPREP RPTDLEVLEE LACVAEALIE ARAVALRAAG AAEERRLAVE
RLERERRQFK QAERMADMGS YRYDIEKQST AWSDGVFAIH ERPVSSGVPN SEVLNYFPEP
DRTAFVAAVM RTLNTGEPFE MDADFVTAKG NPRRVRCSCE IELAKGKPVA LIGLIQDITE
RHDLEQRLRH QACTDDLTQL ANRAEFHRVL DARLREARLA DGDVAVLLID LDGFKGVNDV
LGHAAGDAVL RRVADRLRAS CNDGGVPARL GGDEFAIVMS ADLDCVGLDR KVRRLLHDLE
IVVDGQGLIA RVTGTIGIAW SSAAAQDRDV LLRQADAALY AAKRTRKGTA QTFQAGTDDR
QVG
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