Gene Mpop_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1560 
Symbol 
ID6312827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1684306 
End bp1685388 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID642650285 
ProductNitrilase 
Protein accessionYP_001924261 
Protein GI188580816 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.181863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.904754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCC CGTATCCGAA GTTCAAGGCG GCCGCCTGCC ACGTCGCCCC GGTCTTCCTC 
GACAGTGCCG CCTCCGCCGA GAAGGCGGTC GCCCTGATCG GCGAGGCGGC CCGTGCCGGC
GCCGGCCTCG TGGTCTTCCC CGAGGGCTAC ATGCCGGGCT TCCCCCTCTG GGCGGCCCTG
CGCGCGCCGA TCCACAACCA CGACCTGTTC AAGCGCCTGG CCGCGCAATC CGTGCGCCTC
GACGGGCCGG AGATCGGCCT CGTGCGCGAC GCCGCCCGGC GCCACGGCGT CCTCGTCTCC
CTCGGCTTCA GCGAGAGCAC CGAGGCGAGC GTGGGCTGCC TGTGGAACGC CAACGTGCTG
ATCGGCCGTG ACGGGGCGAT CCTCAACCAT CACCGCAAGC TGGTGCCGAC CTTCTACGAG
AAGCTGATCT GGGCCAACGG CGATGCCCGC GGCCTGCGGG TGACGCCCAC CGAGATCGGC
CGGGTCGGCA TGCTGATCTG CGGCGAGAAC ACCAACCCCC TCGCCCGCTA CGCGCTGATG
GCGCAGGGCG AGCAGGTCCA CATCTCGACC TATCCGCCGG CCTGGCCGAC CCGGCCGCCG
GGGCAGAGCG CCGCCTACGA CCTCGCGCGG GCGATCGAGA TCCGCGCCGG CGCGCACGCT
TTCGAAGCCA AGGTGTTCAA CATCGTCTGC TCCGCCGTGC TCGACTCGGC CGCGCGGGCG
ATCCTCTGCG ACGGGGACGC CGCCATCGCC GACATCGTGG AGCGGACGCC CGCGGGCGTC
TCCATGGTCC TCGACCCCAC CGGCGCGCAT CTCGTGGCGC CGCACCAGGG CGACGAGACC
ATCGTCTACG CCGAGATCGA CGTGGCGGCC TGCGTCGAGC CCAAGCAGTT CCACGACGTC
GTCGGCTACT ACAACCGGTT CGACATCTTC CGGCTCACCG TCGACCGCGC GCCGCGGGAG
CCGATCAGCT TCGAGGCGGC CGTCCGGCCC GCGGGTCCCG CCGCCGAGGG CGAGGGCGCC
GAGGGGTTCG GCCTCGACGC CGCCGCGCAT CGCAGCGAGC CGCCGCACCG CGCAAGCCAC
TGA
 
Protein sequence
MSVPYPKFKA AACHVAPVFL DSAASAEKAV ALIGEAARAG AGLVVFPEGY MPGFPLWAAL 
RAPIHNHDLF KRLAAQSVRL DGPEIGLVRD AARRHGVLVS LGFSESTEAS VGCLWNANVL
IGRDGAILNH HRKLVPTFYE KLIWANGDAR GLRVTPTEIG RVGMLICGEN TNPLARYALM
AQGEQVHIST YPPAWPTRPP GQSAAYDLAR AIEIRAGAHA FEAKVFNIVC SAVLDSAARA
ILCDGDAAIA DIVERTPAGV SMVLDPTGAH LVAPHQGDET IVYAEIDVAA CVEPKQFHDV
VGYYNRFDIF RLTVDRAPRE PISFEAAVRP AGPAAEGEGA EGFGLDAAAH RSEPPHRASH