Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1559 |
Symbol | |
ID | 6312826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1683306 |
End bp | 1684202 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642650284 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001924260 |
Protein GI | 188580815 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.206276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.500122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATT GGAACGATCT CACCTTCTTC CTTGAACTCG CCCGTCACGG ACGGCTGATG CCGGCCGCGC GCCGGCTCAA GGTCGACAAC ACCACGGTCA GCCGCCGCAT CGCCGAGCTG GAGCGGGGGC TCGACACGAA GCTGTTCCAG CGCTGCTCCG ATGGCTTCCT GCTCACCGAG GCCGGGCACA AGCTCTTCGT GATCGCGGAG ATCATCGAGC AGAAGATGCT GTCCGTGCCG GAAGCCCTCG GTCTCTCGGA CGGGGGGGAG CCGGCGGGGC GGGTGCGGGT CGCCAGCATG GAGGGCATCG CCGCGTTCTA CCTCTCGGCC CGGTTCGCCG AATTCGCCGC CGCCATGCCG GGGATCGTGG TCGAACTCGT CACCGAGCGG CACCTGATCA ACCTGACCAA GCGCGAGGCC GACATCTCGG TCTCCTTCGT GCCGCCTCAG GGTCCGCGCC TCAAGGTGCG CCGGGTCGGC GCGTTCCGTC TCGCCCTGTT CGCCTCGGAC CGCTACCTCG CCCTGCGCGG CCGGCCGGAG ACGCGGGCCG ACCTCCAGGA CCACGACTTC GTGGACTATG TCGACGACCT CGTGGCGATC GAGCCGGTGC ATTGGCTGCT CGAGGTCCTG AGACCGAGCA ACGTAGTCTT CCGGTCCACC AGCATGGCCG CGCAGCAGAC CGCCGTCGCC GCGGGGGCCG GACTGGCCCT GCTGCCGCTT TTTTCAGCCA AGACCAACCC GGCGCTCGTC CCGGTCCTGC CGGAGGAGAT CGTGGTGCGG CGCGAACTCT ATCTCGCTGT TCACGAAGAC ATCGAGCATG CCGGCCGGGT CCGTGCGGTG ACCCGCTTCC TCACCGAGCT GTTCACGCGT GAGGCAGCGT ATTTGAACCA ATTCTGA
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Protein sequence | MFDWNDLTFF LELARHGRLM PAARRLKVDN TTVSRRIAEL ERGLDTKLFQ RCSDGFLLTE AGHKLFVIAE IIEQKMLSVP EALGLSDGGE PAGRVRVASM EGIAAFYLSA RFAEFAAAMP GIVVELVTER HLINLTKREA DISVSFVPPQ GPRLKVRRVG AFRLALFASD RYLALRGRPE TRADLQDHDF VDYVDDLVAI EPVHWLLEVL RPSNVVFRST SMAAQQTAVA AGAGLALLPL FSAKTNPALV PVLPEEIVVR RELYLAVHED IEHAGRVRAV TRFLTELFTR EAAYLNQF
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