Gene Mpop_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1545 
Symbol 
ID6312882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1659604 
End bp1660320 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID642650270 
ProductOmpW family protein 
Protein accessionYP_001924246 
Protein GI188580801 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.281829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0125909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC GGCGCGGAGC TTCGGCTCTC AGGGCTTCGA TTCTCGGATC TTCGACTCTC 
GGGGCTTCGG CTCTCACGGC CGCGCTCGGC CTGGCCACGA TGTCCGCCCC GGCCCGAGCC
GCCGACCCGG CCGCGGCTCC GGCCTCGGAA GGCGGGCTGA CCGCCGGGAG CCTGCTCGTG
CGCGGCCGGG TCATCGGCTC CATCCCCGTC GGGCAGTTCT CGCGGGTCGA GCCGATCGGC
GGGCGCGTCA TCACCCCGGC CCGCGCCCTG CCGGACCTCG ACGTGACCTA CTTCCTGTCC
GATCACTTCG CGGTCGCGGG CCAAGTCGGC GTCGTCTCGA CCAAGACCTC GATCCGCGGG
TCGTTCATCG GCGACCTGCC GATCGGCTCG ACCTGGAGCC TCAATCTGAC CGGCGCGGTG
CAGTTCCACT TCCTGCCCGA CAACGCCTTC AATCCGTATG TCGGCGCGGG GGCCGGCTAC
ACGCATCCGA TCGCCTACGA GCCGGCCAAG CCCCTGATCA CCGAGATGAG GGCCGACCCG
CAGCTGGGGC CGATGCTCCA GGCCGGCTTC GACTACCATC TCGGCGGCGC GTGGTTCGCC
AACATGGAGA TCAAGAAGAT CTTCCTGCCG CCGCTGGTCT CGCGGATCGG CGCCGGCAGC
GCGACGGTGC GGCTCGACAT GCTGATCATC GGTGCGGGTC TCGGCTACCG CTTCTGA
 
Protein sequence
MSPRRGASAL RASILGSSTL GASALTAALG LATMSAPARA ADPAAAPASE GGLTAGSLLV 
RGRVIGSIPV GQFSRVEPIG GRVITPARAL PDLDVTYFLS DHFAVAGQVG VVSTKTSIRG
SFIGDLPIGS TWSLNLTGAV QFHFLPDNAF NPYVGAGAGY THPIAYEPAK PLITEMRADP
QLGPMLQAGF DYHLGGAWFA NMEIKKIFLP PLVSRIGAGS ATVRLDMLII GAGLGYRF