Gene Mpop_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1520 
Symbol 
ID6313329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1639399 
End bp1640025 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID642650245 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001924221 
Protein GI188580776 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.431113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG CCACGGCCCA GATCCTGCTC CCTTCCGACG ACGCCGCGCC GACGACGCGC 
GACCGGATCG TGGAGACGGC GGCCCGCTCG TTCCAGGAGA TCGGCTACCA GAAGACCACG
GTCGCCGACA TCGCCCGCAC CCTCAAGATG AGCCCGGCCA ACGTCTACCG CTTCTTCGAG
TCGAAGAAGG CGATCAACGA GGCCGTGGTC GAGCAGCTGA CCGGCGAGAT CGAGGCGATG
ATCGCGGCGA TCGCCGACGC GCCGAAGCTC GGCGCGGCCG AGCGGCTCAC CCGGATCGTC
ACCGCGCTCC ACGACGATTG CCGCCGCCGC TTCGAGGCGC ATCCGCGCGT CCACGAGATG
GTCGAGGCGG CGATGAGCGA GAGCTGGGGG GTCTGCCAAG CGCATGTCGA CCGCATCGGC
GCGGTGTTCA CGCGGGTGGT GGCCGACGGG GTGCGTGAGG GCGCCTTCAC GGTTGCCGAC
CCGAAGAGCG CCGCGGCCTG CCTCCACGCC GGGATCACCC GCTACTGCCA CCCCATGCTG
GTCGGCCGCC AGCCCAACGC GATCGAGCCG CCGCTGCCGG TGATGATCGC CTTCCTGCTC
GGCGCCCTGC GGCCGGCGGG CGACTGA
 
Protein sequence
MSAATAQILL PSDDAAPTTR DRIVETAARS FQEIGYQKTT VADIARTLKM SPANVYRFFE 
SKKAINEAVV EQLTGEIEAM IAAIADAPKL GAAERLTRIV TALHDDCRRR FEAHPRVHEM
VEAAMSESWG VCQAHVDRIG AVFTRVVADG VREGAFTVAD PKSAAACLHA GITRYCHPML
VGRQPNAIEP PLPVMIAFLL GALRPAGD