| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1509 |
|---|
| Symbol | |
|---|
| ID | 6310485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1624347 |
|---|
| End bp | 1625999 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642650234 |
|---|
| Product | malate:quinone oxidoreductase |
|---|
| Protein accession | YP_001924210 |
|---|
| Protein GI | 188580765 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.223394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.79888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA ATCGGCGGCA AGTGATCGGC GGCGCGCTGG CAGGTCTGGC GGCCACCGCC
CTGCCCGGTT CGCCGCTGCT CGCCGCGGGC GAGGCGCGCA AGGTCGATGT CCTGCTGATC
GGCGGCGGCA TCATGAGCGC GACGCTCGGC GTCTGGCTGC GCGAACTCGA GCCCGACTGG
TCGCTGGAGA TGGTCGAGCG GCTCGACGGC GTGGCGCTGG AGAGCTCCAA CGGCTGGAAC
AACGCCGGCA CCGGCCACTC GGCCCTGGCC GAGCTGAACT ACACGCCCGA GGATTCCAAG
GGGAACGTCC AGATCAACAA GGCCGTCGAG ATCAACGAGG CCTTCCAGGT CACCCGCCAG
TTCCTGGCGT GGCAGGTGCA AAAGGGCGTC TTGAAGAACC CCCACTCCTT CATCAATTCC
ACGCCCCACA TGAGCTTCGT CTGGGGCGAC GACAACATCA CCTATCTGCG CAAGCGCTAC
GAGGCGCTCA AAGCCAGCCC GCTCTTTGCC GGGATGGAAT TCTCGACCGA CCCCGAGCAG
GTCAAGAAGT GGGTCCCCCT GATGATGGAG GGGCGCGACC CGAAGCAGAA GGTCGCCGCC
ACATGGTCGC CGCTCGGCAC CGATTGCGAG TGGGGTGAGG TCACCCGCCA GTACATCGCC
TCGCTGAAGA GCGGGCCGAA GTTCGACCTG CGCCTCTCGA CCGAAGTGGA GAGCTTCGAG
CGCAACAAGG ATGGGACTTG GCGCGTCACG TCCAAGAACC TGAAGGACGG CAGCCGGTCC
ACGGTCGATG CCCGGTTCGT GTTCATCGGC GCGGGCGGCG GCGCCCTGCA CCTTCTGCAG
GCCTCCGGCA TCCCCGAGGC CGACGATTAT GCCGGCTTCC CCGTCGGCGG CTCGTTCCTC
GTCACCGAGA ACCAGGACGT GGCCCTGCGC CACCTCGCCA AGGCCTACGG CAAGGCCTCC
GTCGGCTCGC CGCCGATGTC GGTGCCGCAC CTCGACACGC GGATGCTCGA CGGCAAGCGG
GTGATCCTGT TCGGACCGTT CGCGACCTTC TCGACCAAGT TCCTGAAGGA GGGCTCCTAC
TTCGACCTGC TGACCTCGAC CACCACCAGC AACGTCTGGC CGATGGTCCG CGTCGGCGTC
GATCAGTACC CGCTGGTCGA GTACCTCGCC GGCCAGCTGA TGCTCTCCGA CGAGGACCGC
TATCAGGCCC TGCGCGAATA CTTCCCCGAT GCCAAGAAGG ACGAGTGGCG CCTCGTCCAG
GCCGGGCAGC GGGTGCAGAT CATCAAGCGC GATCCGGAGA AGGGCGGCGT CTTGAAGCTC
GGCACCGAGG TGGTGGCGGC CAAGGACGGC AGCATCGCCG CCCTGCTCGG CGCCTCGCCG
GGCGCTTCCA CCGCCGCGCC GATCATGCTG AACGTGCTGG AGAAGGTGTT CGCCAAGCGC
GTCGCCAGCC CGGAATGGCA GGCGAAGATC CGCCAGATCG TGCCGAGCTA CGGCACGAAG
CTGAACGACG ATCCGCAGCG GGTCTACCAG GAACTCGCCT ATACCAGCGA GCACCTGCAG
CTCACCCCGC CGCCGCAGAT CGGCACCCCG GCCCCGGCGC CCGCCGCGGC CGAGATGGGG
ACCGTCAAGC CGGTCCCCGA CATGGCGCCG TAA
|
|---|
| Protein sequence | MPMNRRQVIG GALAGLAATA LPGSPLLAAG EARKVDVLLI GGGIMSATLG VWLRELEPDW
SLEMVERLDG VALESSNGWN NAGTGHSALA ELNYTPEDSK GNVQINKAVE INEAFQVTRQ
FLAWQVQKGV LKNPHSFINS TPHMSFVWGD DNITYLRKRY EALKASPLFA GMEFSTDPEQ
VKKWVPLMME GRDPKQKVAA TWSPLGTDCE WGEVTRQYIA SLKSGPKFDL RLSTEVESFE
RNKDGTWRVT SKNLKDGSRS TVDARFVFIG AGGGALHLLQ ASGIPEADDY AGFPVGGSFL
VTENQDVALR HLAKAYGKAS VGSPPMSVPH LDTRMLDGKR VILFGPFATF STKFLKEGSY
FDLLTSTTTS NVWPMVRVGV DQYPLVEYLA GQLMLSDEDR YQALREYFPD AKKDEWRLVQ
AGQRVQIIKR DPEKGGVLKL GTEVVAAKDG SIAALLGASP GASTAAPIML NVLEKVFAKR
VASPEWQAKI RQIVPSYGTK LNDDPQRVYQ ELAYTSEHLQ LTPPPQIGTP APAPAAAEMG
TVKPVPDMAP
|
|---|
| |