Gene Mpop_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1486 
Symbol 
ID6313600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1601714 
End bp1602424 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID642650211 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001924187 
Protein GI188580742 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0886728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0964346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCG AGATCGTCCT CGACACCGAG ACCACCGGCA CGGACGCCAA GAACGGCGAC 
CGGCTGATCG AGATCGGCTG CGTCGAGCTG ATCAACCACG TCCAGACCGG CAAATTCTAC
CACCAGCTCA TCAACCCGCA GCGGGCGGTG TCCGAGGGGG CGTTCGCGGT CCACGGCATT
TCCGACGCGA TGCTCGCCGA CAAGCCGGTC TTCGCCGACG TGGTCGATGC CTTCGTCGCC
TTCTGCGGCG ATGCGCGGCT GGTGATCCAC AACGCACCCT TCGACGTCGG CTTCCTCAAC
ATGGAGTTCG CCCGGCTCGG ACCCGCCGCC CCGAAGGCGA TTCCGCTGGA GGATGTCGTC
GACACCCTGC TGCTCGCCCG CCGCAAGCAT CCGGGCGCGG CCAACAACCT CGACGCCCTG
TGCAACCGCT ACGGCGTCGA CACCACCCGC CGGGTCAAGC ATGGCGCGCT CCTCGACGCG
CAGATCCTGG CCGAGGTCTA TGTCGAGTTG CTGGGCGGCA AGCAGACCAG CCTGGGGCTC
AGCATCGCCG AACCGACCGA GGCCATCGCG ATCGAGAGCG CGACCGATTC GGGTCCGGTC
GGACCGCGGC CGATGCGCAG CCGGCTCACG GAGAGCGAGC GCCTGCGGCA TGACAGCTTT
GTCGAAAGCC TCGGAACAAA CGCCGTCTGG CGGGAATACT TGGAGCCGTG A
 
Protein sequence
MLREIVLDTE TTGTDAKNGD RLIEIGCVEL INHVQTGKFY HQLINPQRAV SEGAFAVHGI 
SDAMLADKPV FADVVDAFVA FCGDARLVIH NAPFDVGFLN MEFARLGPAA PKAIPLEDVV
DTLLLARRKH PGAANNLDAL CNRYGVDTTR RVKHGALLDA QILAEVYVEL LGGKQTSLGL
SIAEPTEAIA IESATDSGPV GPRPMRSRLT ESERLRHDSF VESLGTNAVW REYLEP