| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1455 |
|---|
| Symbol | |
|---|
| ID | 6309650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1573420 |
|---|
| End bp | 1574334 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642650181 |
|---|
| Product | protein of unknown function DUF58 |
|---|
| Protein accession | YP_001924157 |
|---|
| Protein GI | 188580712 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.183521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.296497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCA CCCGGCTCGT CGAGGCCGAG AGCCGCCGCC CCGGCGGGGC GCAGACCGGC
CGTGCCCTGG CGCTGGCCGA GGTGATGCCG CGGCTCGTGC TCGAATCGCG CCGGGTCTCG
GGCACCCTGG CGCACGGCCT GCACGGCCGC CGCCGCGCGG GGCCGGGCGA GAGCTTCTGG
CAGTTCCGCC CCTTCGTCAC CGGCGAGGCG GCGGCCCGCA TCGACTGGCG CCGCTCGGCC
CGCGACGACC GGCTCTACGT GCGCGAGCGC GAGTGGGAGG CCGCCCACAA CATCTGGATC
TGGATCGACC GCTCCGCCTC CATGGGCTTC GCTTCGGATC TCGCCCAGAC TTCCAAGGTC
GAGCGGGCCC TGGTCCTGGG GCTGGCGCTG GCCGATACCT TCGTGGAAGG CGGCGAGCGC
GTCGGCCTGC TCGGGCTCAC CCGCGCCAGC GCCTCGCGCG GCATCGTCGA GACCCTAACC
CAGGCGCTCG TCAACGACCG GGCCGGCCTC ACACAGGACC TGCCGCCCCC CGCCCGCCCC
GGCCGCTTCG ACGAGGTGGT GCTGGTGAGC GACTTCCTCA CCCCGCTCGA CCGGGTGCGG
GAAGCGGTGC AGGCCAATTC CGTCCACGGC AACCGCGGCC ATCTCGTGCT GGTGGCCGAT
CCGGTGGAGG AGACCTTCCC CTTCACCGGT CAGGCGGTGC TGCACGATCC GGAAGGGGGC
CTGAGCCTCG ATATCGGCGA GGCCGGCGCC TGGGGCGAGG CCTATCGAAG CCGGATCGCG
GCCCATCGCG ACGGCCTGTC CGAGATCGCC CGACAGCGGG GCTGGACGCT GACGATCCAC
CGCACCGACC GGCCGGCGAG CGAGGCGGCC CTGCGCGTCC TCACCCTCGT CGCCGCCGCG
CGCGGGCTCG GCTGA
|
|---|
| Protein sequence | MASTRLVEAE SRRPGGAQTG RALALAEVMP RLVLESRRVS GTLAHGLHGR RRAGPGESFW
QFRPFVTGEA AARIDWRRSA RDDRLYVRER EWEAAHNIWI WIDRSASMGF ASDLAQTSKV
ERALVLGLAL ADTFVEGGER VGLLGLTRAS ASRGIVETLT QALVNDRAGL TQDLPPPARP
GRFDEVVLVS DFLTPLDRVR EAVQANSVHG NRGHLVLVAD PVEETFPFTG QAVLHDPEGG
LSLDIGEAGA WGEAYRSRIA AHRDGLSEIA RQRGWTLTIH RTDRPASEAA LRVLTLVAAA
RGLG
|
|---|
| |