Gene Mpop_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1453 
Symbol 
ID6309648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1568399 
End bp1570489 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content72% 
IMG OID642650179 
Producthypothetical protein 
Protein accessionYP_001924155 
Protein GI188580710 
COG category[S] Function unknown 
COG ID[COG5426] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0355203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.476091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC TCAGCTTCAC GCCCCTCGTC CCCTGGCCGG TGCTCGCCGC CTTCGGCGTG 
CTCGCCGCGA TCCTCGCCGT GCTGGCCGTC CTCGCCCGCG GGCGCACGGC GCTGCTGCGT
GCGGTGGCGC TCGGCCTCGT CCTCCTGGCG CTGGCCAACC CCTCGCTGGT GCGCGAGGAC
CGCGACCCGG TGAAGGACGT GGCCGCCATC GTCGTCGACC GCTCCGGCTC GCAGACGCTG
GGCGACCGCC CGGCGATGAC CGACGCGGTC AAGGCCGAGC TGGAACGCCG CTTCGGCGCG
CTCAGCAACA TCGAGCCCCG CTTCATCGAG GTCGGCGACG CGCAAGGCTC GGAGGGCGAC
GACGGCACCA AGCTGTTCAC CGCGCTGACC CAGGCGCTCG CCGACGTACC GCCCGAGCGG
ATCGCCGGTG TGGTGATGCT CACCGACGGC GTGGTCCACG ACATCCCCGC CTCGCTGGCC
ACCCTCGGGC TGAAGGCGCC GCTGCACGTC CTCGTCACCG GCCGCCCGGA CGAGCGCGAC
CGCCAGATCA AGATGCTGGA AGCCCCCCGC TTCGGCATCG TCGGCAAGGA CGTGACCCTG
CGTGCCGAGG TGATGGAGCG CGGCGGCACC GGTACGGCGG TCGTCACCGT GCGCCGCGAC
GGCGAGGAGA TCGACCGGCA GAGCATCGCG ACCGGCGTGC CGTTCTCGCT CACCACGCAT
ATCGAGCATG GCGGCCCGAA CGTGGTCGAG ATTGAGGTCG AGGCGCTGCC GGGCGAACTC
ACCACGGTCA ACAACCGCGC GGTGCTCCCG ATCGAGGGCA TCCGCGAAAA GCTCCGGGTG
CTGCTCGTCT CCGGCGAGCC GCACCAGGGC GAGCGCACGT GGCGCAACCT CCTGAAGTCG
GACGCCTCGG TCGATCTCGT CCACTTCACG ATTCTCCGGC CGCCGGAGAA GCAGGACGGC
ACCCCGATCT CCGAACTGTC GCTGATCGCC TTCCCGACCC GCGAGCTGTT CGTCCAGAAG
ATCAAGGACT TCGATCTCAT CATCTTCGAC CGCTACGCCA ACCAGAGCGT GCTGCCGTCG
GCCTATTTCG ACAACATCGT CCGCTACGTG CGCGAGGGCG GGGCGCTGCT CATCGCCGCC
GGGCCGGAAT TCGCCGGTCC CGCCAGTCTT GCCCGTACCC GGCTCGCCTC GATCCTGCCG
GGCGATCCCT CGACCAAGGT GGTCGAGCAG CCGTTCAAGG CGACGCTCAC GGAGACAGGA
CACCGCCATC CCGTCACCCG GGCGCTGCCG GGTTCGGAGG CGACCCCGCC GGCCTGGGGC
GACTGGCTGC GCATCATCTC GGCCCAGACC CGGGCGGGGG TGCAGCCGAT CCTGTCCGGC
GCCAACGGCC TGCCGCTGCT GGCTCTTTCC CGCGAGGACA AGGGCCGCGT CGCCCTGATG
CTGTCGGATC AGGCCTGGCT CTGGGCCCGC GGCTACCAGC AGGGCGGCCC CTATCTCGAC
CTGCTGCGGC GCCTCGCCCA CTGGCTGATG AAGGAGCCGG CGCTCGAAGA GGAGGCTCTG
CGCGCCCAGA CCACGGGGCG CGGCCGCGAG GTCCGCGTCG AGCGCCAGAC CATGGCCGAG
GAGGCGGGTC CCGTCACGAT CACCGGCCCG ACCGGCAAGG AGCGGAGCCT CGACCTGTCG
AAGGCGGAGA CCGGCCTGTT CACCGCGACC TTCGAGGCGG AGAGCCTCGG GCTGCACACG
ATCCGCTCGG GCAACCTCGT CGCCTTCGTC AGCGTCGGCC CGGCCAATCC GCGCGAACTC
GCCGACGTGT TCAGCGACAC CGAGCGCCTC AAAGGCGTGG CCGAGGGCTC CGGCGGCACC
GTGCGCCGGG TGGCGGGCTC CGGTGGCGGC ATCGAGGTGC CGCGCCTCCA GATCACCCGC
GGCGGACGGC TCGGCGGCGC CGACTGGATC GGCTTCCGCC CGAGCGACAG CGCCACGATC
CGCGGCGTCG AGGTCTATCC GCTCGGCATC GGCCTATGGG CGCTGGCCGC GCTCGCCGCC
GCCGTGCTGG CGATGTGGCT GGTCGAGGGG CGGCGCGGGC GCGCCGCTTA G
 
Protein sequence
MLSLSFTPLV PWPVLAAFGV LAAILAVLAV LARGRTALLR AVALGLVLLA LANPSLVRED 
RDPVKDVAAI VVDRSGSQTL GDRPAMTDAV KAELERRFGA LSNIEPRFIE VGDAQGSEGD
DGTKLFTALT QALADVPPER IAGVVMLTDG VVHDIPASLA TLGLKAPLHV LVTGRPDERD
RQIKMLEAPR FGIVGKDVTL RAEVMERGGT GTAVVTVRRD GEEIDRQSIA TGVPFSLTTH
IEHGGPNVVE IEVEALPGEL TTVNNRAVLP IEGIREKLRV LLVSGEPHQG ERTWRNLLKS
DASVDLVHFT ILRPPEKQDG TPISELSLIA FPTRELFVQK IKDFDLIIFD RYANQSVLPS
AYFDNIVRYV REGGALLIAA GPEFAGPASL ARTRLASILP GDPSTKVVEQ PFKATLTETG
HRHPVTRALP GSEATPPAWG DWLRIISAQT RAGVQPILSG ANGLPLLALS REDKGRVALM
LSDQAWLWAR GYQQGGPYLD LLRRLAHWLM KEPALEEEAL RAQTTGRGRE VRVERQTMAE
EAGPVTITGP TGKERSLDLS KAETGLFTAT FEAESLGLHT IRSGNLVAFV SVGPANPREL
ADVFSDTERL KGVAEGSGGT VRRVAGSGGG IEVPRLQITR GGRLGGADWI GFRPSDSATI
RGVEVYPLGI GLWALAALAA AVLAMWLVEG RRGRAA