Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1436 |
Symbol | cobN |
ID | 6313674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1550809 |
End bp | 1554243 |
Gene Length | 3435 bp |
Protein Length | 1144 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 642650162 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_001924138 |
Protein GI | 188580693 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.11738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.80922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCTGA TCCGCCTCGA TACGGTCTCC CTCGATGAGG GCGAGGCGGC GGTCGATCTC GGCCAGAGCC CGGGCGAGAT CGTCTTTCTG TCGTTTACCG ATACGGACTT GGCGGCCGTC GCCCGCGCGC ACGCGGCCGA GCCCGGCCTG CCGTCGCTGC GGCTCGCCAA GATGGCGCAG CTGCGCCACC CGATGTCGGT CGATCTCTAC GTCGACGGGG TGATCGCCCG CGCCAGGGTC TGCGTCATCC GCTGCCTCGG CGGGCTCGAT TACTGGCGCT ACGGCATCGA GCGCGCCGCC GTGGCGGCCC GGGCGCACGG TGTGCGGCTC GCGGTCCTGC CCGGCGACGA CCGGCCGGAC CCGCGCCTCG ACGCCTTCTC CACGCTGCCG GCGGAGACCT GCGCCCGCCT CGACGCCTAT TTCCGCGCGG GCGGGCCGGA GAACCTGAAG AACCTGCTGC GCTGCCTCGC GTCGGAGGCG GGCGCCGCCT TCGAACCGGC GCCGCCGCGG GCGCTGCCGC GGGGCTTCGC GTGGTGTCCC GGCTGCGGGC CGCTCCCCGT CGAGGCGGCG ATGCAGGCCG CCGGGCCGGG ACCGCTGGCG CTGCTGCTGG TCTACCGCTC GGCGGTGCTC TCCGGCGAGA CCGCGCCCGC CGCCCGGCTC GCCGCGTCCC TCGCCGAACG CGGCATCGGT TGCGTTACGC TCGCAGTGTC GAGCCTGAAG GACCCGGAAG CGGTCGCCGT CCTGCGCACG GCGTTGGCCG CGCGCCGGCC CGACATCGTG CTCGCGGCCA CCGCCTTCTC CGCCCGCGAC GATGCCGGCT TCGTGCTCGA TGCCGCCGCC TGCCCCGTGA TCCAGGCCTA CACGATCGGC GCGCCCCGCG ACGCCTGGGC CGCCTCGGGC CGGGGCATGA ACGCGGCCGA CCTCGCCATG CAGGTGGCCT TGCCGGAATT CGACGGGCGG CTCTCGGGCT TCCCGATTTC GTTCAAGGAG GAGGCCGAGG CGGTCGAGGG GTTTTCCGAA CGCCGCGCCG TGCCCGACCC CGCCGGCATC GCCGCGCTTG CCGACCGCGC CGCCGCCTGG ATCCGTCTGC GGCGGACGCC GCGCGGGAAG CGCCGGCTCG CGATGGTGCT CTCCGACTAT CCCGCCCGCG GCGGCCGGGC CGGCTACGCG GTTGGCCTCG ACACGCCGGA CAGCGCCCGT GCCATCGCCG CCGACCTCGC CGCGGCCGGG TTTGCCGCGG GCGCGTTGCC GGAGGCGGGC GCACTGATGG CGGCGCTCAC CGCGGGCGAG CCCGGCTTTG CGGTCCCGCT CGCCGATTAT GCGGCATGGT TCGAGGCACT GCCGGACGAG CGGCGGGCGG AACTGACCGA GCGCTGGGGC GCACCGGAGG CTGACCCGCT CTGCCGTGAT GGAGCGTTCC GGTTCCGGAT GGTGCGAGCC GATGTCGCGC ACATCGAGAG GCTCGAGCTG AAACGCCCCC TCACCGTCGC TCCCGCTTGT CGCGCCGACG ACGAGGTCGT CGCGACCCGC CCCCCGCGTG CGGGGAGAGG GGATGCGCAC GACGACGCGC GTGAAGCCGA CCGCGCAGGT CTTGCCCTCT TCCTTCAGCC CGACCGCGGC CGCGCCGCCG ACCGCAAGGC CGGCTACCAC GACCCCGACG AGCCGCCGAC CCACGCCTAT CTCGCCTTCT ATCTCGGCCT GCGCGAAGGC TTCGACGCGC TGATCCATCT CGGCACCCAC GGCACCACCG AGTGGCTGCC GGGCAAGGCG GTGGCGCTGT CGCCGGATTG CTGGCCGGCG CGGGCGGTCG GGGCGCTGCC GGTGATCTAT CCCTTCATCG TCGACGATCC CGGCGAGGCC GCGCCGGCCA AGCGCCGGCT CGGCGGGATC GCACTGGGAC ACCTCACCCC CACGATCGAG GCCGCCGGCC TCACCCCCGA GGCCGCGGCG CTCCGCGAAC TCGTCGAAGA ATACTCCGCC GCGAGCGTCC TCGACCCGCG CCGGGCCGGG CTGATCGCCG AGGCGATCCT GGATGAAGCC GCCTCCGCCG GCCTGCTCGC GGGTGCAGGG ATCGACGGCG ACACGCCGAT GGCCGACGCG CTGACCGCCC TCGACGCGCA TCTGTGCGAT CTGGGCGAGA CGCCGTTCCG CGACGGCCTG CACGTGTTCG GCCGCGCCCC CGCGGACGCC GCCGAGCCGG TCCGCGCCAG TGCGGAGGCC GAGCGCGCCG CCCTCGTCGC CGCTCTCGAT GGCCGCTTCG TCGCGCCGGG TCCGGCCGGC TCGCCCTCGC GCGGGCGACA GGACGTGATG CCGACCGGCC GCAACCTGAC GACGCTCGAC CCGCGCAGCC TGCCCACCCG TGCCGCGACG ATGCTCGGCA CCAAGGCGGC CGACGCCGTG GTGCGCCGCT ACCTGCAGGA CGAGGGCGAG TATCCGGCGC GCATCGTCAT GGATCTGTGG GCCTCGCCGA CTTTGCGCAC CGGCGGCGAG GACGTGGCCC ATGCCCTGGC GCTGATGGGC GTGCGCCCGG TCTGGGACCA TGCCTCGACC CGCGTCACCG GCTTCGAGGT GCTGCCGCTG GCCCTCCTCG ACCGGCCGCG CATCGACGTG ACCTGCCGCG TCTCCGGCGC CTTCCGCGAC ACCTTCCCCG AGACCCTGGC GCTGCTCGAC CGCGCCGCCC GCGCCGTCGC CGCCCGCGAG GAGGAGGACG AGGAGAACCC CCTCGCCGCC GCCCGGCGCC GGGGCGAATC CGCCGCGCGC ATCTACGGCG CCGCCCCCGG CCGCTACGGC GCGGGGACGG CCGAGACGGC GCTCGACGGC GCATGGGAGG CGCGCGCCGA TCTGGGTCGG GCCTATCTTG CCGCCACCAC CCATGCCTAC GGCGATGCGG ACGGCGCGGA CGCGGATTTC GCCGCCCGCG TCGCCGCGGC GGACGCCTAT GTCCACGCCT TCGATGTCGC CGAGCGCGAC CTGCTCGATG GCGACGCGGC GGCCGACGCC ATGGGCGGGT TCTTCGCCGC CGCCGCGTCC GAGGGGAGGG CGCCCGCCCT CTACAGCCTC GACGTCTCGA ACCCGGAGGC GCCGCGCCCC CGCACCGCCC GCGAGGACGT CGCCCGGCTG ATCCGCGGCC GGCTCGGCCA TCCGCGCTGG ATCGCGGCGC AGCTCCGCCA CGGCTACCGC GGCGCGCAGG AACTGGCGCA GGGGCTCGAC GCGGTGTTCG TGCTCGCCGC CGCGACCGAT GCGGTGTCGA GCGAGGATCT CGACCGGCTC TACGGCGCCT GGATCGCCGA TCCGGAGATC TTCGAGGCCT TGAAGGCGGC CAACCCGGAG GCGACCCGCG CCATTCTCGA ACGCTTCGAG GAGATGCGGC TGCGCGGCCT GTGGCAGAGC CGGCGCAACG CGGCGCCCAC GGATGCGATG ATGGCTGCCG AATGA
|
Protein sequence | MHLIRLDTVS LDEGEAAVDL GQSPGEIVFL SFTDTDLAAV ARAHAAEPGL PSLRLAKMAQ LRHPMSVDLY VDGVIARARV CVIRCLGGLD YWRYGIERAA VAARAHGVRL AVLPGDDRPD PRLDAFSTLP AETCARLDAY FRAGGPENLK NLLRCLASEA GAAFEPAPPR ALPRGFAWCP GCGPLPVEAA MQAAGPGPLA LLLVYRSAVL SGETAPAARL AASLAERGIG CVTLAVSSLK DPEAVAVLRT ALAARRPDIV LAATAFSARD DAGFVLDAAA CPVIQAYTIG APRDAWAASG RGMNAADLAM QVALPEFDGR LSGFPISFKE EAEAVEGFSE RRAVPDPAGI AALADRAAAW IRLRRTPRGK RRLAMVLSDY PARGGRAGYA VGLDTPDSAR AIAADLAAAG FAAGALPEAG ALMAALTAGE PGFAVPLADY AAWFEALPDE RRAELTERWG APEADPLCRD GAFRFRMVRA DVAHIERLEL KRPLTVAPAC RADDEVVATR PPRAGRGDAH DDAREADRAG LALFLQPDRG RAADRKAGYH DPDEPPTHAY LAFYLGLREG FDALIHLGTH GTTEWLPGKA VALSPDCWPA RAVGALPVIY PFIVDDPGEA APAKRRLGGI ALGHLTPTIE AAGLTPEAAA LRELVEEYSA ASVLDPRRAG LIAEAILDEA ASAGLLAGAG IDGDTPMADA LTALDAHLCD LGETPFRDGL HVFGRAPADA AEPVRASAEA ERAALVAALD GRFVAPGPAG SPSRGRQDVM PTGRNLTTLD PRSLPTRAAT MLGTKAADAV VRRYLQDEGE YPARIVMDLW ASPTLRTGGE DVAHALALMG VRPVWDHAST RVTGFEVLPL ALLDRPRIDV TCRVSGAFRD TFPETLALLD RAARAVAARE EEDEENPLAA ARRRGESAAR IYGAAPGRYG AGTAETALDG AWEARADLGR AYLAATTHAY GDADGADADF AARVAAADAY VHAFDVAERD LLDGDAAADA MGGFFAAAAS EGRAPALYSL DVSNPEAPRP RTAREDVARL IRGRLGHPRW IAAQLRHGYR GAQELAQGLD AVFVLAAATD AVSSEDLDRL YGAWIADPEI FEALKAANPE ATRAILERFE EMRLRGLWQS RRNAAPTDAM MAAE
|
| |