| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1427 |
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| Symbol | |
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| ID | 6313818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1542185 |
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| End bp | 1543450 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642650153 |
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| Product | phage major capsid protein, HK97 family |
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| Protein accession | YP_001924129 |
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| Protein GI | 188580684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.370183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAGA TGCGTTTCGA GACCAAGGCC CCCGCAGGCC TTCCCGAGAA CAAGGCGGCG
ATGTTCGGCA CCGAGTCGGT GCTCGACGAG TTCGCCCGCG CCTTCGAAGC GTTCAAGGAG
GCCAACGACA CCCGGCTCGC CGAGATCGAA ACCCGCCTGA CGGCCGACGT GGTGACCGAG
GAGAAGCTCG CCCGCATCGA TGCGGCCCTG GATCAGGCGA AGACCCGTCT CGACCGGATC
AGCCTCGACC GCGCCCGGCC GCCGCTCGGC GGGGCGGAGC CGCCGCGCGA TGCCTCCGCC
ACCGAGCACA AGGCGGCGTT CGACCTCTAT GTCCGCGCCG GCGAGAGCGC CGGCCTCAAG
CGGCTGGAGG AGAAGGCGCT GTCGGCCGGC TCCGGCCCGG ATGGCGGCTA TCTCGTTCCG
CCGACGATCG AGCGCGAGGT GCTGCGGCGC TTGGCCGAGA TCTCGCCGAT CCGCGCCATC
GCCACGGTCC GGACCGTCTC CGGCGGACAA TACAAACGGG CGGTCACCGT CAACGGCCCC
GCCGCCGGCT GGGTCGCCGA GACCGCGCCG CGACCGCAGA CCGACGCGCC GAGCCTGTCC
GAACTCAGCT TCCCGGCGAT GGAACTCTAC GCCATGCCGG CGGCGACGCA GACGCTGCTC
GACGACGCCG TGCTCGACAT CGATGCGTGG CTCGCCGAGG AGGTGGAGAC GGCGTTCGCC
GAGCAGGAGA GCGTCGCCTT CGTCACCGGC AACGGCATCG GCCGGCCGAA GGGTTTCCTC
AGCTACGACA CGGTCGCCAA TGCGAGCTGG GCGGCGGGCA AGCTCGGCTT CACCACGACG
GGGGCGTCGG GGGCCTTTGC CGCGAGCAAT CCGAGCGACG TGCTGTTCGA CCTGATCTAC
GCCCTGCGCG CCGGCTACCG CCAGGGCGCG AGCTTCGTGA TGAACCGGCG GGTGCAGAGC
GCAATCCGCA AGTTCAAGGA TGCGGACGGC AACTACCTCT GGCAGCCGCC GCTCGCGGCC
GACCGGGCCG CGACCCTGAT GGGCTTCCCC CTCGTCGAGG CCGAGGCGAT GCCCGACATC
AGTGCCGGCA GCCACTCGAT CGCCTTCGGC GACTTCAAGC GCGGCTATCT CGTGGTGGAC
CGCGTCGGCC TGCGCACCCT GCGCGACCCG TACTCCGCCA AGCCCTACGT CCTGTTCTAC
ACCACCAAGC GCGTCGGCGG CGGCGTGCAG GACTTCGCCG CGATCAAGCT GCTGCGGTTC
GCCTGA
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| Protein sequence | MTEMRFETKA PAGLPENKAA MFGTESVLDE FARAFEAFKE ANDTRLAEIE TRLTADVVTE
EKLARIDAAL DQAKTRLDRI SLDRARPPLG GAEPPRDASA TEHKAAFDLY VRAGESAGLK
RLEEKALSAG SGPDGGYLVP PTIEREVLRR LAEISPIRAI ATVRTVSGGQ YKRAVTVNGP
AAGWVAETAP RPQTDAPSLS ELSFPAMELY AMPAATQTLL DDAVLDIDAW LAEEVETAFA
EQESVAFVTG NGIGRPKGFL SYDTVANASW AAGKLGFTTT GASGAFAASN PSDVLFDLIY
ALRAGYRQGA SFVMNRRVQS AIRKFKDADG NYLWQPPLAA DRAATLMGFP LVEAEAMPDI
SAGSHSIAFG DFKRGYLVVD RVGLRTLRDP YSAKPYVLFY TTKRVGGGVQ DFAAIKLLRF
A
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