Gene Mpop_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1400 
Symbol 
ID6309907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1520046 
End bp1520507 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content72% 
IMG OID642650126 
Productcytochrome C biogenesis protein 
Protein accessionYP_001924102 
Protein GI188580657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.287486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0562024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC TTCGCTCCAT CCTCGCCGCG CTGACCTTGA GCCTCGCCGC CCTGCCGGCA 
CTCGCCGTGC AGCCCGACGA GGTGCTCAAG GACCCCGCCC TAGAGGCGCG GGCGCGGGCG
ATCTCGGAGG GGCTGCGCTG CCTCGTCTGC CAGAACCAGT CGATCGACGA TTCCGACGCG
CCGCTCGCCA AGGATCTGCG CGTGCTGGTG CGCGAGCGGC TGAAAGAGGG CGACAGCAAC
GGCCAAGTGG TCGATTACGT GGTGGCCCGC TACGGCGAGT TCGTGCTGCT GCGCCCCGTC
TTCGGCTGGC ACACGCTGCT GCTCTGGCTG AGCCCGCTGC TCGCGGTGGG CCTCGGCGCC
TTCGGCATCT GGCGCCTGTC GCGCCGCCGC GCGCCGGTGC GGGCGGAGGG GCTGTCGGCC
GCGGAGCAGG CTGAGGTCGA GGCGCTGCTC AAGCGGCCTT AG
 
Protein sequence
MTRLRSILAA LTLSLAALPA LAVQPDEVLK DPALEARARA ISEGLRCLVC QNQSIDDSDA 
PLAKDLRVLV RERLKEGDSN GQVVDYVVAR YGEFVLLRPV FGWHTLLLWL SPLLAVGLGA
FGIWRLSRRR APVRAEGLSA AEQAEVEALL KRP