| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1355 |
|---|
| Symbol | |
|---|
| ID | 6310581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1470357 |
|---|
| End bp | 1471403 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642650082 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001924058 |
|---|
| Protein GI | 188580613 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00847555 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACT ACGCCGGTCT GGATGTCTCG TTGGCGGAGA CGTCGGTGTG CGTCGTCGAT
GAGGAGGGCA AGATCCTCCG CGAGGCCAAG GTCGCCAGCG AACCGGAAGC GCTGGCGACC
TGGCTTGGCG CTCTCGGCCT ACCGCTGACC CGTGTCGGCC TGGAGACCGG GGCGCTGGCA
GGCTGGCTAT GCGAGGAGAT GACCGAACTC GGCGTGCCCA ACGTCGTCTG CATGGACGCG
CGGCACGCCC GCGCCGCGAT GGTCGCGATG ACTCACAAGA CCGACCGCAA CGACGCGCGC
GGCCTCGCCC AGATGCTGCG CACCGGCTGG TTCCGGCAGG TCCACGTGAA GGCACGCCGG
ACGATGGAGT TGCGGACCCT GCTCACCAGC CGGAAGACGC TGGTGCTGAA GATCGGCGAC
GTCGAGAACC AAATCCGCGG CTCGCTCTGC CTGTTCGGGA TCAAGCTCGG CACCGCCAAG
CGCCGGACCT TTTCGGAGCG AGTGCGTGAG CTGACAGCAG ACCTGCCGCG CGTCGCCGCC
ATCCTCGACG TGCTGTTGCA GGCGCATTCG GCGATGCTGC TGTCGCTCGA CCGGCTCAAT
CGCATGGTAC TGGAGATCGC CCGCGAGCAC GCGGTCTGCC GGAGGCTGAT GACGGTGCCC
GGCGTCGGGG CCGTGGTCGG CCTGACGTTC ATCGCTGCCA TCGAGGACCC AGCCCGCTTC
GCCAAGTCGC GTTCGGTCGG GGCGATCCTC GGTCTGGTGC CGCGCAAGCA TCAGTCCGGG
GAGGTGGACC GGAACGGGCG GATCACCAAG ACGGGAGACA CCGAGGCACG GGCGGCGCTG
TTCGAAGCGG CGCACGTGAT GCTGCACCGG GTCAAGAAGT GGTCCGGGCT GAAGGCGTGG
GCCACGAAGG TGGCACAGCG CCAGGGCAAC AAGCGCGCGA CGGTGGCGCT GGCCCGCAAG
ATGGCGGTGG TGATGCACCG GATGTGGGTG GACGGCACGA CCTTCCGCTT CAGCGCGGTT
GAGGCTCCGG CCGCCGCCAC CGCGTAG
|
|---|
| Protein sequence | MRYYAGLDVS LAETSVCVVD EEGKILREAK VASEPEALAT WLGALGLPLT RVGLETGALA
GWLCEEMTEL GVPNVVCMDA RHARAAMVAM THKTDRNDAR GLAQMLRTGW FRQVHVKARR
TMELRTLLTS RKTLVLKIGD VENQIRGSLC LFGIKLGTAK RRTFSERVRE LTADLPRVAA
ILDVLLQAHS AMLLSLDRLN RMVLEIAREH AVCRRLMTVP GVGAVVGLTF IAAIEDPARF
AKSRSVGAIL GLVPRKHQSG EVDRNGRITK TGDTEARAAL FEAAHVMLHR VKKWSGLKAW
ATKVAQRQGN KRATVALARK MAVVMHRMWV DGTTFRFSAV EAPAAATA
|
|---|
| |