| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1348 |
|---|
| Symbol | |
|---|
| ID | 6308941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1464518 |
|---|
| End bp | 1465618 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642650077 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_001924053 |
|---|
| Protein GI | 188580608 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.558727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000177044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG TTGCGCCGAA AGCAAGTAAT CATTACGCAG CACTTGACGC TCTGCGCGGT
GTCGCCGCTT TATCTGTTCT GTTGTTTCAT TTTCACGAAT GGCTAGGTCA GAAATGGCTG
GCCCCAAATG CAAGATTTGC CGTAGATTTC TTCTTTTGCC TGAGTGGATA TGTTCTTTCG
GCAGCATACG ATAAGAAAAT AAATGATGGG TGGGCCAAAT CAAGTTTTTT ACTGACTCGG
TTGATAAGAC TCTTCCCTAT AATTATCCTT GGTACAATGA TAAGCGCGTT GTATTATTTT
ATTCGCGTTT ATAAATTCGG GTATTCTCTA GATTACGACG TGCAGCTACA TGCGCTCGTT
CTAGGCTTAA CTAATTTGCC TTTTTTGAAC GCCCCGAAAG CGATCGGGGG ACCTCAAGTG
TTCCCATTAA ACGGCCCGCA ATACACACTT TTTTTGGAGC TTGCAGTAAA CTTGTTTTGG
GTGGCAACTC ACAGGGTAAG CTCATTATAT TTTATTGCTA TCTTGATCGC TGCAAGCTTT
GGCTTGATGT GCTTATTTGG CATAGGAGGT GATACAACTG AAACGTTTTG GCTCGGGCTT
CCCCGAGTTG TAGGAGCATT TTATCTCGGC GTGCTGTCGT TTAGATTAGA GTCACGGACT
TATGGCATTG ATGAACGTTA TGCCTGGGGA CTTTTTGTTG CGATCTCCGC TGCAACAGCC
CTGTTCTTCT ATTGGCCATC AACCATGCCT GATATTTCGG GGGTTATTTG GGGTTTTATT
GTATCTCCTA TCATCGTTGT ATGTGGATCT CGCGTTTCCC TAAGTCAGCG CTCTAAGCGA
GTAGGTATTA TCCTTGGACA GTTATCATAT CCTATTTATG CATTGCAATT TCCCATATTC
CTTTGGATCA ATGGAGTATA TCAGCAGATA ACTGGCTATC GCGACCCAAT CACTTTGATG
ATAGTCCTTG TATTTGTCGT CCCGACAATT TCTTGGTTGG TACTACGCTT TTATGATGAG
CCGGTTCGGA AATATCTCAA CAAAATAAAT CACAGGCATC GCACTAGAGG ATCTGTTGCA
GGAGGCAATT TAACTCGGTA G
|
|---|
| Protein sequence | MSMVAPKASN HYAALDALRG VAALSVLLFH FHEWLGQKWL APNARFAVDF FFCLSGYVLS
AAYDKKINDG WAKSSFLLTR LIRLFPIIIL GTMISALYYF IRVYKFGYSL DYDVQLHALV
LGLTNLPFLN APKAIGGPQV FPLNGPQYTL FLELAVNLFW VATHRVSSLY FIAILIAASF
GLMCLFGIGG DTTETFWLGL PRVVGAFYLG VLSFRLESRT YGIDERYAWG LFVAISAATA
LFFYWPSTMP DISGVIWGFI VSPIIVVCGS RVSLSQRSKR VGIILGQLSY PIYALQFPIF
LWINGVYQQI TGYRDPITLM IVLVFVVPTI SWLVLRFYDE PVRKYLNKIN HRHRTRGSVA
GGNLTR
|
|---|
| |